RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 FAM72DQ6L9T8 149 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 C14orf80Q86SX3 495 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 FAM72BQ86X60 149 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
USP49-201ENST00000373006 CENPLQ8N0S6 344 aaPredicted RBP13.86□□□□□ -0.19
USP49-201ENST00000373006 CLK4Q9HAZ1 481 aaKnown RBP13.86□□□□□ -0.19
USP49-201ENST00000373006 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
USP49-201ENST00000373006 AKT3Q9Y243 479 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 TPST1O60507 370 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 CLIC3O95833 236 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 MCF2P10911 925 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 UGT1A6P19224 532 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 SLC5A3P53794 718 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 ANO4Q32M45 955 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 ELMSAN1Q6PJG2 1045 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 CHSY3Q70JA7 882 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 CYP4F12Q9HCS2 524 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 IGSF9Q9P2J2 1179 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 VTI1BQ9UEU0 232 aa13.86□□□□□ -0.19
USP49-201ENST00000373006 FBP2O00757 339 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 SDHDO14521 159 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 AP2A1O95782 977 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 TMED10P49755 219 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 DPYSQ14117 519 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 RFTN1Q14699 578 aaPredicted RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 IL31Q6EBC2 164 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 CNSTQ6PJW8 725 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GPR141Q7Z602 305 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 CEP97Q8IW35 865 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 DENND6AQ8IWF6 608 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 SLC7A5P1Q8MH63 180 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 LRRC43Q8N309 656 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 SMYD1Q8NB12 490 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 OR9I1Q8NGQ6 314 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 HMGCLL1Q8TB92 370 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 C12orf43Q96C57 262 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 OSBPL6Q9BZF3 934 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 IL22Q9GZX6 179 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 AHSGP02765 367 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GABRB3P28472 473 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 TSPY1Q01534 308 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 CD300CQ08708 224 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 HERC3Q15034 1050 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 ZC3HC1Q86WB0 502 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 RNF135Q8IUD6 432 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 SLC7A14Q8TBB6 771 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 STYXQ8WUJ0 223 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 FTHL17Q9BXU8 183 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 PAIP1Q9H074 479 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 CNOT6Q9ULM6 557 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 EVPLQ92817 2033 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 HEATR9A2RTY3 570 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 EEF2KO00418 725 aaKnown RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 HOXD12P35452 270 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GRIA3P42263 894 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 PRKCQQ04759 706 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 DMPKQ09013 629 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GJC2Q5T442 439 aaPredicted RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 ZNF618Q5T7W0 954 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 TSTD2Q5T7W7 516 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 DCAF15Q66K64 600 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 MAMDC4Q6UXC1 1216 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 NT5DC4Q86YG4 428 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 C18orf25Q96B23 403 aaPredicted RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 MLPHQ9BV36 600 aaPredicted RBP13.85□□□□□ -0.19
USP49-201ENST00000373006 IL1RL2Q9HB29 575 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 PLGRKTQ9HBL7 147 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 TNFRSF12AQ9NP84 129 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
USP49-201ENST00000373006 ATP6AP2A0A1C7CYW4 349 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SH3PXD2BA1X283 911 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 M0QYT0 321 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SLC22A2O15244 555 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 ATP6AP2O75787 350 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 C8BP07358 591 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 CD68P34810 354 aaPredicted RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 PLK1P53350 603 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 RABGGTBP53611 331 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SNX16P57768 344 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 MPP1Q00013 466 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 FASTKQ14296 549 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 NHSL2Q5HYW2 709 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SYPL2Q5VXT5 272 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 REP15Q6BDI9 236 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms