RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SNNO75324 88 aaPredicted RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 HDCP19113 662 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 DNAJB2P25686 324 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 YWHAQP27348 245 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 GEN1Q17RS7 908 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 PKN3Q6P5Z2 889 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 C16orf59Q7L2K0 433 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 ZC3HC1Q86WB0 502 aaKnown RBP11.9□□□□□ -0.5
PDE6C-201ENST00000371447 MFSD6LQ8IWD5 586 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 ARHGEF38Q9NXL2 777 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 TAGLN3Q9UI15 199 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 PCDHB5Q9Y5E4 795 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 ZSWIM8A7E2V4 1837 aa11.9□□□□□ -0.5
PDE6C-201ENST00000371447 A0A0D9SEW6 157 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ATP6AP2A0A1C7CYW4 349 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 M0QZQ0 153 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TRIM13O60858 407 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ATP6AP2O75787 350 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 CIB2O75838 187 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ANXA9O76027 345 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SOX11P35716 441 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 NPY2RP49146 381 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 NME5P56597 212 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 PRAMEP78395 509 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 DSC3Q14574 896 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TAF12Q16514 161 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 PIM3Q86V86 326 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SCUBE1Q8IWY4 988 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ZNF398Q8TD17 642 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SLC26A7Q8TE54 656 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 HDAC10Q969S8 669 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ACOT9Q9Y305 439 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MATN3O15232 486 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ADAM12O43184 909 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SPATA31D3P0C874 917 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 STMN1P16949 149 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ELF1P32519 619 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MS4A13Q5J8X5 152 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 RTP2Q5QGT7 225 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SPATA31D4Q6ZUB0 917 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 SEMA3CQ99985 751 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 RRN3Q9NYV6 651 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MCM8Q9UJA3 840 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 FBXO5Q9UKT4 447 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 KLF11O14901 512 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 BIRC5O15392 142 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TIMM44O43615 452 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TBX10O75333 385 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 RPS24P62847 133 aaKnown RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 POLD3Q15054 466 aaPredicted RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 ANO4Q32M45 955 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TIFABQ6ZNK6 161 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 RIPOR1Q6ZS17 1223 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MON1AQ86VX9 555 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 OR7D4Q8NG98 312 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 OR52K2Q8NGK3 314 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 USP13Q92995 863 aaPredicted RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 MRGPRX2Q96LB1 330 aa11.89□□□□□ -0.51
PDE6C-201ENST00000371447 KIAA0100Q14667 2235 aaKnown RBP11.89□□□□□ -0.51
PDE6C-201ENST00000371447 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 G3V2L1 256 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 BNIP3LO60238 219 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 TLR5O60602 858 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ALDH2P05091 517 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 GLDCP23378 1020 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 CCNCP24863 283 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 HCAR3P49019 387 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ARSDP51689 593 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 WLSQ5T9L3 541 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SNX30Q5VWJ9 437 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 PGAP3Q96FM1 320 aaPredicted RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SMOC2Q9H3U7 446 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ARL5AQ9Y689 179 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ZBTB14O43829 449 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SLC35E2BP0CK96 405 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SCNN1BP51168 640 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 GEMP55040 296 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 CDH13P55290 713 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 DENND5AQ6IQ26 1287 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 LINGO4Q6UY18 593 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms