RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SH3RF3Q8TEJ3 882 aaPredicted RBP8.66□□□□□ -1.02
LCA5-201ENST00000369846 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
LCA5-201ENST00000369846 ADPRHL2Q9NX46 363 aa8.66□□□□□ -1.02
LCA5-201ENST00000369846 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
LCA5-201ENST00000369846 MTRRQ9UBK8 725 aa8.66□□□□□ -1.02
LCA5-201ENST00000369846 TRPC4Q9UBN4 977 aa8.66□□□□□ -1.02
LCA5-201ENST00000369846 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
LCA5-201ENST00000369846 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 KHDRBS3O75525 346 aaKnown RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 CRTAMO95727 393 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 ANGPTL1O95841 491 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 IFNA7P01567 189 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 MGAT1P26572 445 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 TGFBR2P37173 567 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 PTPN5P54829 565 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 DLG1Q12959 904 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 RALGPS1Q5JS13 557 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 CRTC1Q6UUV9 634 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 GCNT7Q6ZNI0 430 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 AHSA2Q719I0 299 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 SLC22A9Q8IVM8 553 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 SLC34A3Q8N130 599 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 TTC39CQ8N584 583 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 TOR1AIP2Q8NFQ8 470 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 RXFP2Q8WXD0 754 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 LPGAT1Q92604 370 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 C12orf43Q96C57 262 aaKnown RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 GMCL1Q96IK5 515 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 ZNF560Q96MR9 790 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 BRD7Q9NPI1 651 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 CLN6Q9NWW5 311 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 USP20Q9Y2K6 914 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 SAMHD1Q9Y3Z3 626 aaKnown RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 MTF2Q9Y483 593 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 H7C1W4 665 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 TPP1O14773 563 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 JCHAINP01591 159 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 C9P02748 559 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 CREB1P16220 341 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 PORP16435 677 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 GRIK1P39086 918 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 MAGEA12P43365 314 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 PIK3CGP48736 1102 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 POLD2P49005 469 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 DRG2P55039 364 aaKnown RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 DCDC1P59894 354 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 POU6F1Q14863 301 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 ARSHQ5FYA8 562 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 GALNT5Q7Z7M9 940 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 CIR1Q86X95 450 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 FAM156AQ8NDB6 213 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 SLC7A14Q8TBB6 771 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 TNFAIP8L1Q8WVP5 186 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 KCNS3Q9BQ31 491 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 SMPD3Q9NY59 655 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 SAE1Q9UBE0 346 aaPredicted RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 MALT1Q9UDY8 824 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 UBQLN1Q9UMX0 589 aaKnown RBP8.65□□□□□ -1.02
LCA5-201ENST00000369846 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 LAMA4Q16363 1823 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 CACNA1FO60840 1977 aa8.65□□□□□ -1.02
LCA5-201ENST00000369846 RGS10O43665 173 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 ANXA9O76027 345 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 LTFP02788 710 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 MPOP05164 745 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 CHRM5P08912 532 aaPredicted RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 NR2F6P10588 404 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 CCNB1P14635 433 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 PHKG2P15735 406 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 TSPAN8P19075 237 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 EIF2S3P41091 472 aaKnown RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 GSTM5P46439 218 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 AP3M2P53677 418 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 AP2S1P53680 142 aaPredicted RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 SLC18A2Q05940 514 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 STRIP1Q5VSL9 837 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 ANKS6Q68DC2 871 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 R3HCC1LQ7Z5L2 792 aaKnown RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 TRIM48Q8IWZ4 208 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 COLGALT1Q8NBJ5 622 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 FRMD8P1Q9BZ68 369 aaPredicted RBP8.65□□□□□ -1.03
LCA5-201ENST00000369846 COQ10BQ9H8M1 238 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 ITM2CQ9NQX7 267 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 PADI4Q9UM07 663 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 PEX16Q9Y5Y5 336 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 FMN2Q9NZ56 1722 aa8.65□□□□□ -1.03
LCA5-201ENST00000369846 C12orf71A8MTZ7 269 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 MID1O15344 667 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 PSKH1P11801 424 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 ACAT1P24752 427 aaKnown RBP8.64□□□□□ -1.03
LCA5-201ENST00000369846 MARCKSL1P49006 195 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 ACADVLP49748 655 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
LCA5-201ENST00000369846 ORC1Q13415 861 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
LCA5-201ENST00000369846 PPP2R2DQ66LE6 453 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 PIGWQ7Z7B1 504 aa8.64□□□□□ -1.03
LCA5-201ENST00000369846 SPPL2CQ8IUH8 684 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms