RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 GRM5P41594 1212 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 IREB2P48200 963 aaKnown RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 GTF2A2P52657 109 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CAPSQ13938 189 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 OXA1LQ15070 435 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 KDM1BQ8NB78 822 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 ZNF669Q96BR6 464 aaPredicted RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 FBXL20Q96IG2 436 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 PGLYRP2Q96PD5 576 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 DNAI2Q9GZS0 605 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 TMEM181Q9P2C4 612 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 TCAF1Q9Y4C2 921 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 RNF103-CHMP3A0A140T963 221 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 TMEM233B4DJY2 109 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CLOCKO15516 846 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 KDM1AO60341 852 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CLIC3O95833 236 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 NR3C2P08235 984 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 DPYSL2Q16555 572 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 FRA10AC1Q70Z53 315 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 ANKRD52Q8NB46 1076 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 OR13F1Q8NGS4 319 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 HMGCLL1Q8TB92 370 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 HEXIM2Q96MH2 286 aaKnown RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 TSNARE1Q96NA8 513 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CGREF1Q99674 301 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 C9orf16Q9BUW7 83 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 FTHL17Q9BXU8 183 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 SLC38A10Q9HBR0 1119 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CCM2LQ9NUG4 571 aaPredicted RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MRGBPQ9NV56 204 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CPQQ9Y646 472 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 DDHD2O94830 711 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 VDRP11473 427 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 PABPC1P11940 636 aaKnown RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MAPK10P53779 464 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MPP1Q00013 466 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 FASTKQ14296 549 aaKnown RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 NANOGNBQ7Z5D8 188 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 ACVR1CQ8NER5 493 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CXorf38Q8TB03 319 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 SCYL1Q96KG9 808 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 LGMNQ99538 433 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MTG1Q9BT17 334 aaPredicted RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
HIPK1-206ENST00000369559 MROQ9BYG7 248 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 LRRC40Q9H9A6 602 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 NANOGQ9H9S0 305 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 GGA3Q9NZ52 723 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 SUN2Q9UH99 717 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 CROTQ9UKG9 612 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 ANKRD6Q9Y2G4 727 aa10.17□□□□□ -0.78
HIPK1-206ENST00000369559 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 RNF103O00237 685 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 MSCO60682 206 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 SRP72O76094 671 aaKnown RBP10.16□□□□□ -0.78
HIPK1-206ENST00000369559 CPNE6O95741 557 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 SUPT20HL2P0C7V6 817 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 C7P10643 843 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 HDCP19113 662 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 ATP6V1B2P21281 511 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 MATN1P21941 496 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 PSMB4P28070 264 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 GLRBP48167 497 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 TNK2Q07912 1038 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 SUPT20HL1Q3ZLR7 823 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 AGKQ53H12 422 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 NCBP2-AS2Q69YL0 99 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 ANKRD13AQ8IZ07 590 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 OFCC1Q8IZS5 231 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 WNK4Q96J92 1243 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 FEM1CQ96JP0 617 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 CSPG4P5Q96PW8 444 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 SGIP1Q9BQI5 828 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 C1QTNF1Q9BXJ1 281 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 ZFYVE28Q9HCC9 887 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 GBA2Q9HCG7 927 aaPredicted RBP10.16□□□□□ -0.78
HIPK1-206ENST00000369559 AGPAT4Q9NRZ5 378 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 CCDC167Q9P0B6 97 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 TLK1Q9UKI8 766 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 AURKCQ9UQB9 309 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 FAM149AA5PLN7 773 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 NRP1O14786 923 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 MRASO14807 208 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 LSM1O15116 133 aaKnown RBP10.16□□□□□ -0.78
HIPK1-206ENST00000369559 CYP2C9P11712 490 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 SQLEQ14534 574 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 FAM45BPQ6NSW5 357 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 NEPROQ6NW34 567 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 GADL1Q6ZQY3 521 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 TMCO5AQ8N6Q1 288 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 FAM45AQ8TCE6 357 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 PNPT1Q8TCS8 783 aaKnown RBP10.16□□□□□ -0.78
HIPK1-206ENST00000369559 STYXQ8WUJ0 223 aa10.16□□□□□ -0.78
HIPK1-206ENST00000369559 EFHD2Q96C19 240 aaPredicted RBP10.16□□□□□ -0.78
HIPK1-206ENST00000369559 VPS39Q96JC1 886 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms