RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 IFI16Q16666 785 aaKnown RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ODF2Q5BJF6 829 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 PLPP6Q8IY26 295 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF592Q92610 1267 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF419Q96HQ0 510 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 HSPA12BQ96MM6 686 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GDAP1L1Q96MZ0 367 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 BTBD1Q9H0C5 482 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GMEB2Q9UKD1 530 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 NCKAP1Q9Y2A7 1128 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 SDK1Q7Z5N4 2213 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 PLXNA2O75051 1894 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 OTOGLQ3ZCN5 2332 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 APOL1O14791 398 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 SEMA4FO95754 770 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 IGSF6O95976 241 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 RETP07949 1114 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 CREB5Q02930 508 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF33AQ06730 810 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 LBRQ14739 615 aaKnown RBP15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 MYLK3Q32MK0 819 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 AGBL4Q5VU57 503 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 FAM46CQ5VWP2 391 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 KAZNQ674X7 775 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 RUBCNQ92622 972 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 ALG3Q92685 438 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 LOXL4Q96JB6 756 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 HERPUD2Q9BSE4 406 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 CINPQ9BW66 212 aaPredicted RBP15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 TSGA10Q9BZW7 698 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 SMOC1Q9H4F8 434 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 PARD6AQ9NPB6 346 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 FZD4Q9ULV1 537 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 HEY1Q9Y5J3 304 aa15.3■□□□□ 0.04
SMPDL3A-201ENST00000368440 hCG_1818297A0A087WSY0 165 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 KRT86O43790 486 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 ITPKAP23677 461 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PEX5P50542 639 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 ADPRHP54922 357 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 SPEM2Q0P670 501 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 FAM182AQ5T1J6 154 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PIP5KL1Q5T9C9 394 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 AADACL2Q6P093 401 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PGBD5Q8N414 524 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 NSMCE3Q96MG7 304 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF599Q96NL3 588 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 SGK2Q9HBY8 427 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 TMEM74BQ9NUR3 256 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 TTC24A2A3L6 582 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 BCLAF3A2AJT9 711 aaKnown RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 FAM47DPA6NHR8 397 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PIGNO95427 931 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 UGT2B4P06133 528 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 MAOBP27338 520 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 TAS2R38P59533 333 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 RFTN1Q14699 578 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 LYSMD4Q5XG99 296 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 PARS2Q7L3T8 475 aaKnown RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 CYP2U1Q7Z449 544 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 RCOR2Q8IZ40 523 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 OR14C36Q8NHC7 312 aa15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 SAE1Q9UBE0 346 aaPredicted RBP15.29■□□□□ 0.04
SMPDL3A-201ENST00000368440 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 CST8O60676 142 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 POP4O95707 220 aaKnown RBP15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 TGM1P22735 817 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 MPLP40238 635 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 TFDP3Q5H9I0 405 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 NCEH1Q6PIU2 408 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 B4GALNT4Q76KP1 1039 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 PIGKQ92643 395 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 HDAC11Q96DB2 347 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 KLHL32Q96NJ5 620 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 OLFM3Q96PB7 478 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 PSKH2Q96QS6 385 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 LGMNQ99538 433 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 HEMGNQ9BXL5 484 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 KCND1Q9NSA2 647 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 SEPT3Q9UH03 358 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms