RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 POLD2P49005 469 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 CLCNKBP51801 687 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 LINGO4Q6UY18 593 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.32
PTPRK-207ENST00000368226 GDPD5Q8WTR4 605 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 HSFY1Q96LI6 401 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 PADI3Q9ULW8 664 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 C2CD2Q9Y426 696 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 ISM1B1AKI9 464 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 C1QTNF3-AMACRE9PGA6 284 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 ANXA5P08758 320 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 TFEBP19484 476 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 FASP25445 335 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 NAGLUP54802 743 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 NCF4Q15080 339 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 DUSP28Q4G0W2 176 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 STK32CQ86UX6 486 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.32
PTPRK-207ENST00000368226 ZC3H7AQ8IWR0 971 aaKnown RBP13.02□□□□□ -0.32
PTPRK-207ENST00000368226 NMD3Q96D46 503 aaKnown RBP13.02□□□□□ -0.32
PTPRK-207ENST00000368226 C1orf50Q9BV19 199 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 VTI1BQ9UEU0 232 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 COG5Q9UP83 839 aa13.02□□□□□ -0.32
PTPRK-207ENST00000368226 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 TLE6Q9H808 572 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 NFKBIL1Q9UBC1 381 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 LRPAP1P30533 357 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 CLYBLQ8N0X4 340 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 CD84Q9UIB8 345 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 ADAM28Q9UKQ2 775 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 HLA-DQA2P01906 255 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 CATP04040 527 aaKnown RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 RPL17P18621 184 aaKnown RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 MC4RP32245 332 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
PTPRK-207ENST00000368226 XKR6Q5GH73 641 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
PTPRK-207ENST00000368226 ACRP10323 421 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 DEFA1P59665 94 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 DEFA3P59666 94 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 AFTPHQ6ULP2 937 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 EID3Q8N140 333 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 OR8H2Q8N162 312 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 AENQ8WTP8 325 aaKnown RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 ARMC7Q9H6L4 198 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 BRD9Q9H8M2 597 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 COL20A1Q9P218 1284 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 LYVE1Q9Y5Y7 322 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 hCG_1818297A0A087WSY0 165 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 PTGES3LE9PB15 166 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SASH3O75995 380 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SMIM28A0A1B0GU29 152 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 FFAR2O15552 330 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 EPN2O95208 641 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 CST3P01034 146 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 HNRNPLP14866 589 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 17.5
PTPRK-207ENST00000368226 GRIA4P48058 902 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SEMA5AQ13591 1074 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 NEDD8Q15843 81 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 ZACNQ401N2 412 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 PSRC1Q6PGN9 363 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 HDAC10Q969S8 669 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 TRMT13Q9NUP7 481 aaKnown RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SLC25A14O95258 325 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-207ENST00000368226 LINC00032P0C843 101 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 SMPD1P17405 629 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 MATKP42679 507 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 OR6Y1Q8NGX8 325 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 ITFG1Q8TB96 612 aa13.01□□□□□ -0.33
PTPRK-207ENST00000368226 BTBD9Q96Q07 612 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms