RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 EIF4EBP2Q13542 120 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 ITGA7Q13683 1181 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 PIGGQ5H8A4 983 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 PRAMEF19Q5SWL8 479 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 CWF19L1Q69YN2 538 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 LSMEM2Q8N112 164 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 C2CD4AQ8NCU7 369 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 MAELQ96JY0 434 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 GPR78Q96P69 363 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 Q9H521 79 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 EFCAB1Q9HAE3 211 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 ZBTB26Q9HCK0 441 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 XPR1Q9UBH6 696 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 ZDHHC2Q9UIJ5 367 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 DTNAQ9Y4J8 743 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 TRPV2Q9Y5S1 764 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 DFFAO00273 331 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 NEMP1O14524 444 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 IRAK2O43187 625 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 VAPBO95292 243 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 PGK1P00558 417 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 HSPA1AP0DMV8 641 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 HSPA1BP0DMV9 641 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 ATP5F1P24539 256 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 IGFBP6P24592 240 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 FKBP1BP68106 108 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 ZNF423Q2M1K9 1284 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 MMEL1Q495T6 779 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 LIN52Q52LA3 116 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 MANEALQ5VSG8 457 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 RWDD4Q6NW29 188 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 AFAP1L2Q8N4X5 818 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 KDM1BQ8NB78 822 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 AGR3Q8TD06 166 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 CCDC126Q96EE4 140 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 GAD1Q99259 594 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 FICDQ9BVA6 458 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 NUF2Q9BZD4 464 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 MRPL40Q9NQ50 206 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 CLIC5Q9NZA1 410 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 NCKIPSDQ9NZQ3 722 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 HACD3Q9P035 362 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 DSEQ9UL01 958 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 MAGED2Q9UNF1 606 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 TIMM13Q9Y5L4 95 aaPredicted RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 SLC4A7Q9Y6M7 1214 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 GOLGA8TH3BQL2 631 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 MAFKO60675 156 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 F7P08709 466 aaPredicted RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 SAT1P21673 171 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 SH3BGRP55822 239 aaPredicted RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 ILF2Q12905 390 aaKnown RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 POU6F1Q14863 301 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 MAPRE1Q15691 268 aaKnown RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 RARS2Q5T160 578 aaKnown RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 AFMIDQ63HM1 303 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 HIPK4Q8NE63 616 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 IPMKQ8NFU5 416 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 SPATA22Q8NHS9 363 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 CALML6Q8TD86 181 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 USP33Q8TEY7 942 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 RCN3Q96D15 328 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 CDRT15Q96T59 188 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 RTP3Q9BQQ7 232 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 TREX1Q9NSU2 369 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 TBC1D13Q9NVG8 400 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 UTP6Q9NYH9 597 aaKnown RBP14.46□□□□□ -0.09
CD48-201ENST00000368045 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.09
CD48-201ENST00000368045 ARL5CA6NH57 179 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 DENRO43583 198 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 KPNA6O60684 536 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ME2P23368 584 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ARNTP27540 789 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 GLRBP48167 497 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CHN2P52757 468 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 THOP1P52888 689 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 SLC12A2P55011 1212 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 NRG1Q02297 640 aaPredicted RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 ART3Q13508 389 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 FLOT2Q14254 428 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PDK3Q15120 406 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 MAPRE2Q15555 327 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PSMD5Q16401 504 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 UPP1Q16831 310 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 LRRC36Q1X8D7 754 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 GRAMD1BQ3KR37 738 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 NXNQ6DKJ4 435 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ESRP1Q6NXG1 681 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 MRPL10Q7Z7H8 261 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 MARVELD2Q8N4S9 558 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 C3orf58Q8NDZ4 430 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ADCY4Q8NFM4 1077 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CEP70Q8NHQ1 597 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 NCSTNQ92542 709 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 NXNL1Q96CM4 212 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ELMO2Q96JJ3 720 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PKMYT1Q99640 499 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 DDX50Q9BQ39 737 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 WDR41Q9HAD4 459 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms