RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 NUDT12Q9BQG2 462 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 LRMDAQ9H2I8 198 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 C2CD2LO14523 706 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 GNB5O14775 395 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 ANXA5P08758 320 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 ELK3P41970 407 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 MEA1Q16626 185 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 PIK3R6Q5UE93 754 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 ANXA8L1Q5VT79 327 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 SULT1C3Q6IMI6 304 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 C10orf107Q8IVU9 208 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 HM13Q8TCT9 377 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 CIPCQ9C0C6 399 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
TPR-201ENST00000367478 CETPP11597 493 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TSHRP16473 764 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 ZNF268Q14587 947 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 MED28Q9H204 178 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 ZMYM5Q9UJ78 669 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PRDM15P57071 1507 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 RXFP2Q8WXD0 754 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TRPV5Q9NQA5 729 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 MPZL2O60487 215 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 MMP14P50281 582 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 SUZ12Q15022 739 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 TMC7Q7Z402 723 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TNFAIP8L1Q8WVP5 186 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 RERGQ96A58 199 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 OR10H2O60403 315 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 RAB27AP51159 221 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 POLNQ7Z5Q5 900 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 AKAP1Q92667 903 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPR-201ENST00000367478 FNDC11Q9BVV2 318 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 BHLHE41Q9C0J9 482 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 KCNA10Q16322 511 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TTC29Q8NA56 475 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 MRPL57Q9BQC6 102 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 MSH4O15457 936 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 NR2F1P10589 423 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 CYP2C18P33260 490 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 CRY1Q16526 586 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 HHIPL2Q6UWX4 724 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 HELQQ8TDG4 1101 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 EHD1Q9H4M9 534 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PSMD13Q9UNM6 376 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 MEMO1Q9Y316 297 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 NEO1Q92859 1461 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 SCN1BQ07699 218 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PLCZ1Q86YW0 608 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TBC1D21Q8IYX1 336 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 FAM136AQ96C01 138 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 MED11Q9P086 117 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 H0YJX3 145 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 AKAP8O43823 692 aaKnown RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 SGPL1O95470 568 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 CCNE2O96020 404 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 GJA8P48165 433 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 TBX4P57082 545 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 PTPRNQ16849 979 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 CTXN3Q4LDR2 81 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 DNAJC14Q6Y2X3 702 aaPredicted RBP12.55□□□□□ -0.4
TPR-201ENST00000367478 KLHL23Q8NBE8 558 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
TPR-201ENST00000367478 SLC12A8A0AV02 714 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 DHRS12A0PJE2 317 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 NOS1APO75052 506 aaPredicted RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 SLC4A11Q8NBS3 891 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 ADCY10Q96PN6 1610 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 CASKO14936 926 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 CST1P01037 141 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 SERPINA4P29622 427 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 PTDSS1P48651 473 aaKnown RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 APBA2Q99767 749 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 POLR1EQ9GZS1 481 aaKnown RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 SAMD4AQ9UPU9 718 aaKnown RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 GNEQ9Y223 722 aaKnown RBP12.54□□□□□ -0.4
TPR-201ENST00000367478 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 USP41Q3LFD5 358 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 GPAT3Q53EU6 434 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
TPR-201ENST00000367478 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms