RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 NLRP14Q86W24 1093 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 PHF13Q86YI8 300 aaPredicted RBP15.09■□□□□ 0.01
CTSD-202ENST00000367196 DENND6BQ8NEG7 585 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 OR2AP1Q8NGE2 309 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 RFFLQ8WZ73 363 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 ARHGEF2Q92974 986 aaKnown RBP15.09■□□□□ 0.01
CTSD-202ENST00000367196 USP29Q9HBJ7 922 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 FZD3Q9NPG1 666 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 FANCLQ9NW38 375 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 LIMA1Q9UHB6 759 aaKnown RBP15.09■□□□□ 0.01
CTSD-202ENST00000367196 DNAI1Q9UI46 699 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 ZFR2Q9UPR6 939 aaKnown RBP15.09■□□□□ 0.01
CTSD-202ENST00000367196 CLCA2Q9UQC9 943 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 FADS3Q9Y5Q0 445 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 CELSR3Q9NYQ7 3312 aa15.09■□□□□ 0.01
CTSD-202ENST00000367196 ATRXP46100 2492 aa15.08■□□□□ 0.01
CTSD-202ENST00000367196 A0A087WV48 116 aa15.08■□□□□ 0
CTSD-202ENST00000367196 SIGLEC6O43699 453 aa15.08■□□□□ 0
CTSD-202ENST00000367196 PIAS2O75928 621 aa15.08■□□□□ 0
CTSD-202ENST00000367196 POP4O95707 220 aaKnown RBP15.08■□□□□ 0
CTSD-202ENST00000367196 CDK11BP21127 795 aaKnown RBP15.08■□□□□ 0
CTSD-202ENST00000367196 ACVRL1P37023 503 aa15.08■□□□□ 0
CTSD-202ENST00000367196 DUSP3P51452 185 aaPredicted RBP15.08■□□□□ 0
CTSD-202ENST00000367196 HDAC4P56524 1084 aa15.08■□□□□ 0
CTSD-202ENST00000367196 UBXN1Q04323 297 aa15.08■□□□□ 0
CTSD-202ENST00000367196 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
CTSD-202ENST00000367196 TARDBPQ13148 414 aaKnown RBP eCLIP15.08■□□□□ 0
CTSD-202ENST00000367196 ZNF805Q5CZA5 627 aa15.08■□□□□ 0
CTSD-202ENST00000367196 ARTNQ5T4W7 220 aa15.08■□□□□ 0
CTSD-202ENST00000367196 DNAJC24Q6P3W2 148 aa15.08■□□□□ 0
CTSD-202ENST00000367196 C19orf48Q6RUI8 117 aa15.08■□□□□ 0
CTSD-202ENST00000367196 Q6ZSR6 202 aa15.08■□□□□ 0
CTSD-202ENST00000367196 PHLDB2Q86SQ0 1253 aa15.08■□□□□ 0
CTSD-202ENST00000367196 PARGQ86W56 976 aa15.08■□□□□ 0
CTSD-202ENST00000367196 MARCH9Q86YJ5 346 aa15.08■□□□□ 0
CTSD-202ENST00000367196 JOSD2Q8TAC2 188 aa15.08■□□□□ 0
CTSD-202ENST00000367196 ASB12Q8WXK4 309 aa15.08■□□□□ 0
CTSD-202ENST00000367196 GDAP1L1Q96MZ0 367 aa15.08■□□□□ 0
CTSD-202ENST00000367196 EPAS1Q99814 870 aa15.08■□□□□ 0
CTSD-202ENST00000367196 CATSPERBQ9H7T0 1116 aa15.08■□□□□ 0
CTSD-202ENST00000367196 NLGN3Q9NZ94 848 aa15.08■□□□□ 0
CTSD-202ENST00000367196 NCKIPSDQ9NZQ3 722 aa15.08■□□□□ 0
CTSD-202ENST00000367196 IPO11Q9UI26 975 aaKnown RBP15.08■□□□□ 0
CTSD-202ENST00000367196 AK5Q9Y6K8 562 aa15.08■□□□□ 0
CTSD-202ENST00000367196 SIGLEC16A6NMB1 481 aa15.07■□□□□ 0
CTSD-202ENST00000367196 C16orf96A6NNT2 1141 aa15.07■□□□□ 0
CTSD-202ENST00000367196 KRIT1O00522 736 aa15.07■□□□□ 0
CTSD-202ENST00000367196 EPHB6O15197 1021 aa15.07■□□□□ 0
CTSD-202ENST00000367196 KDELR3O43731 214 aa15.07■□□□□ 0
CTSD-202ENST00000367196 IGSF6O95976 241 aa15.07■□□□□ 0
CTSD-202ENST00000367196 EPHB2P29323 1055 aa15.07■□□□□ 0
CTSD-202ENST00000367196 RFC1P35251 1148 aaPredicted RBP15.07■□□□□ 0
CTSD-202ENST00000367196 CLDN2P57739 230 aa15.07■□□□□ 0
CTSD-202ENST00000367196 PDZD3Q86UT5 571 aa15.07■□□□□ 0
CTSD-202ENST00000367196 SLC22A18ASQ8N1D0 253 aa15.07■□□□□ 0
CTSD-202ENST00000367196 SLC25A45Q8N413 288 aa15.07■□□□□ 0
CTSD-202ENST00000367196 CCDC185Q8N715 623 aa15.07■□□□□ 0
CTSD-202ENST00000367196 RTL3Q8N8U3 475 aaKnown RBP15.07■□□□□ 0
CTSD-202ENST00000367196 HNRNPLLQ8WVV9 542 aaKnown RBP15.07■□□□□ 0
CTSD-202ENST00000367196 BAP1Q92560 729 aa15.07■□□□□ 0
CTSD-202ENST00000367196 LENG8Q96PV6 779 aaPredicted RBP15.07■□□□□ 0
CTSD-202ENST00000367196 ERGIC2Q96RQ1 377 aa15.07■□□□□ 0
CTSD-202ENST00000367196 C1QTNF7Q9BXJ2 289 aa15.07■□□□□ 0
CTSD-202ENST00000367196 GPR27Q9NS67 375 aa15.07■□□□□ 0
CTSD-202ENST00000367196 NDFIP2Q9NV92 336 aa15.07■□□□□ 0
CTSD-202ENST00000367196 DNAJC28Q9NX36 388 aa15.07■□□□□ 0
CTSD-202ENST00000367196 MYLKQ15746 1914 aa15.06■□□□□ 0
CTSD-202ENST00000367196 TDRD6O60522 2096 aaKnown RBP15.06■□□□□ 0
CTSD-202ENST00000367196 SPTY2D1-AS1A0A0U1RR47 76 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FAM72CH0Y354 149 aa15.06■□□□□ 0
CTSD-202ENST00000367196 TRIM38O00635 465 aa15.06■□□□□ 0
CTSD-202ENST00000367196 SCAMP1O15126 338 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FGF10O15520 208 aaPredicted RBP15.06■□□□□ 0
CTSD-202ENST00000367196 FFAR2O15552 330 aa15.06■□□□□ 0
CTSD-202ENST00000367196 BUB1O43683 1085 aa15.06■□□□□ 0
CTSD-202ENST00000367196 PAK4O96013 591 aaPredicted RBP15.06■□□□□ 0
CTSD-202ENST00000367196 GP1BAP07359 652 aa15.06■□□□□ 0
CTSD-202ENST00000367196 CKMT1AP12532 417 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FERP16591 822 aa15.06■□□□□ 0
CTSD-202ENST00000367196 HTR7P34969 479 aa15.06■□□□□ 0
CTSD-202ENST00000367196 ABCG1P45844 678 aa15.06■□□□□ 0
CTSD-202ENST00000367196 ZNF143P52747 638 aaPredicted RBP15.06■□□□□ 0
CTSD-202ENST00000367196 YBEYP58557 167 aaPredicted RBP15.06■□□□□ 0
CTSD-202ENST00000367196 PTP4A2Q12974 167 aa15.06■□□□□ 0
CTSD-202ENST00000367196 RTP5Q14D33 572 aa15.06■□□□□ 0
CTSD-202ENST00000367196 PARP15Q460N3 678 aa15.06■□□□□ 0
CTSD-202ENST00000367196 INO80DQ53TQ3 878 aaPredicted RBP15.06■□□□□ 0
CTSD-202ENST00000367196 FAM72AQ5TYM5 149 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FAM72DQ6L9T8 149 aa15.06■□□□□ 0
CTSD-202ENST00000367196 DCUN1D2Q6PH85 259 aa15.06■□□□□ 0
CTSD-202ENST00000367196 WDR59Q6PJI9 974 aa15.06■□□□□ 0
CTSD-202ENST00000367196 LRRC69Q6ZNQ3 347 aa15.06■□□□□ 0
CTSD-202ENST00000367196 MON1BQ7L1V2 547 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FAM72BQ86X60 149 aa15.06■□□□□ 0
CTSD-202ENST00000367196 FAM181AQ8N9Y4 354 aa15.06■□□□□ 0
CTSD-202ENST00000367196 MCEEQ96PE7 176 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms