RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 FSCBQ5H9T9 825 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 C17orf99Q6UX52 265 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 MEPCEQ7L2J0 689 aaKnown RBP3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMC8Q8IU68 726 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 RBFAQ8N0V3 343 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 NEXN-AS1Q8NBZ9 246 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 SH3KBP1Q96B97 665 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 GFM1Q96RP9 751 aaKnown RBP3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 PSMD1Q99460 953 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZPBPQ9BS86 351 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 MSTO1Q9BUK6 570 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 ENTPD7Q9NQZ7 604 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM160Q9NX00 188 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 ALKBH4Q9NXW9 302 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 RRN3Q9NYV6 651 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 GGA3Q9NZ52 723 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 HSF4Q9ULV5 492 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 ADGRF5Q8IZF2 1346 aa3.39□□□□□ -1.87
RNU4-48P-201ENST00000365559 CKAP5Q14008 2032 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 C17orf113A0A1B0GUU1 675 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 EYA2O00167 538 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 GTPBP1O00178 669 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 VWA5AO00534 786 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 KIF1CO43896 1103 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CEP104O60308 925 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 EIF3JO75822 258 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ACAA1P09110 424 aaPredicted RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CTPS1P17812 591 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 TKTP29401 623 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 HOXD3P31249 432 aaPredicted RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 TTKP33981 857 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CCT5P48643 541 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CENPAP49450 140 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CRYZQ08257 329 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CAPSQ13938 189 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZRSR2Q15696 482 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 IL20RBQ6UXL0 311 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 MOB3CQ70IA8 216 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 PRSS45Q7RTY3 260 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ADGRG6Q86SQ4 1221 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 MON1AQ86VX9 555 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CHD1LQ86WJ1 897 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZNF354CQ86Y25 554 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 PALB2Q86YC2 1186 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CPXCR1Q8N123 301 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CPXM2Q8N436 756 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 MIGA1Q8NAN2 632 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 MCPH1Q8NEM0 835 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM163Q8TC26 289 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 GDPD5Q8WTR4 605 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 RUFY2Q8WXA3 655 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 NEUROG1Q92886 237 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 ELP4Q96EB1 424 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 THOC3Q96J01 351 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 MAELQ96JY0 434 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 YME1L1Q96TA2 773 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CD180Q99467 661 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 EYA3Q99504 573 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 NTPCRQ9BSD7 190 aaKnown RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM204Q9BSN7 226 aa3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 TTYH1Q9H313 450 aaPredicted RBP3.38□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLEC18AA5D8T8 446 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 LACTBL1A8MY62 500 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 KDM4EB2RXH2 506 aaPredicted RBP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ITM2AO43736 263 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 SLC28A2O43868 658 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 SOX30O94993 753 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 HOXC6P09630 235 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 NAGAP17050 411 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 TNFRSF8P28908 595 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 MAPK9P45984 424 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 CXCR3P49682 368 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 LTBQ06643 244 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 FAM27E3Q08E93 113 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 LPIN1Q14693 890 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 SHBQ15464 509 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZNF585BQ52M93 769 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZNF667Q5HYK9 610 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 RUSC1-AS1Q66K80 236 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 NCAPH2Q6IBW4 605 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 RETSATQ6NUM9 610 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 MON1BQ7L1V2 547 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 SMC5Q8IY18 1101 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 IQCF1Q8N6M8 205 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 CLEC18CQ8NCF0 446 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ELP5Q8TE02 316 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ADAMTS15Q8TE58 950 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 TBC1D22AQ8WUA7 517 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 TMEM170AQ8WVE7 144 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 GPR63Q9BZJ6 419 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 IFT80Q9P2H3 777 aaPredicted RBP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 ZNF580Q9UK33 172 aa3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 SRPRBQ9Y5M8 271 aaKnown RBP3.37□□□□□ -1.87
RNU4-48P-201ENST00000365559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms