RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 LIN28AQ9H9Z2 209 aaKnown RBP19.3■□□□□ 0.68
CMTM3-201ENST00000361909 TANC1Q9C0D5 1861 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 CFLARO15519 480 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 ASGR1P07306 291 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 CXCL8P10145 99 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 C21orf59P57076 290 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 KCNC4Q03721 635 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 MAPRE2Q15555 327 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 KCNA10Q16322 511 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 NRF1Q16656 503 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 CASC4Q6P4E1 433 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 SLC27A1Q6PCB7 646 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 DCDC5Q6ZRR9 648 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 CLEC14AQ86T13 490 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 ANKFN1Q8N957 763 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 PPP1R13LQ8WUF5 828 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 THAP11Q96EK4 314 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 BCO2Q9BYV7 579 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 IL22Q9GZX6 179 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 C8orf4Q9NR00 106 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 MTMR10Q9NXD2 777 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 PACSIN3Q9UKS6 424 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 GINS2Q9Y248 185 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 B3GNT3Q9Y2A9 372 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 A0A1B0GTW7 788 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 TRIM43BA6NCK2 446 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 PSMD12O00232 456 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-201ENST00000361909 HTRA2O43464 458 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-201ENST00000361909 TMEM192Q8IY95 271 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 MFSD2AQ8NA29 543 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 RXFP2Q8WXD0 754 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 PBXIP1Q96AQ6 731 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 CNDP2Q96KP4 475 aaKnown RBP19.29■□□□□ 0.68
CMTM3-201ENST00000361909 ZNF512Q96ME7 567 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-201ENST00000361909 PLEKHA5Q9HAU0 1116 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 SLC38A7Q9NVC3 462 aa19.29■□□□□ 0.68
CMTM3-201ENST00000361909 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-201ENST00000361909 LACTBL1A8MY62 500 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 HACD1B0YJ81 288 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 C9IYK1 514 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 CABYRO75952 493 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 PDGFRAP16234 1089 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 DCKP27707 260 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 HALP42357 657 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 DPP6P42658 865 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 LIMK2P53671 638 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 TFAMQ00059 246 aaKnown RBP19.28■□□□□ 0.68
CMTM3-201ENST00000361909 MOGQ16653 247 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 SLC10A6Q3KNW5 377 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 PPP4R4Q6NUP7 873 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 SCARA5Q6ZMJ2 495 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 USP13Q92995 863 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-201ENST00000361909 PLEKHA8Q96JA3 519 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 RBBP8Q99708 897 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 TRPV6Q9H1D0 765 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 OXSMQ9NWU1 459 aa19.28■□□□□ 0.68
CMTM3-201ENST00000361909 TCRBV3S1A0A5B6 114 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 TMEM247A6NEH6 219 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 PAPSS1O43252 624 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-201ENST00000361909 C7P10643 843 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 SLC5A3P53794 718 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 PTPN11Q06124 597 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-201ENST00000361909 HEATR6Q6AI08 1181 aaKnown RBP19.27■□□□□ 0.68
CMTM3-201ENST00000361909 ITPRIPL1Q6GPH6 555 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 DCLRE1AQ6PJP8 1040 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 NAPRTQ6XQN6 538 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 RNF180Q86T96 592 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 SLAIN1Q8ND83 568 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 ATP6V1E2Q96A05 226 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 BRD8Q9H0E9 1235 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 UNC93B1Q9H1C4 597 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 SARDHQ9UL12 918 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 A0A0A0MRY4 1105 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 MICAL2O94851 1124 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 POLBP06746 335 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 INHBBP09529 407 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 MYF6P23409 242 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 HOXD12P35452 270 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 HADHAP40939 763 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 CCDC14Q49A88 953 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 NHSL2Q5HYW2 709 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 PPM1JQ5JR12 505 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 GDF6Q6KF10 455 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-201ENST00000361909 SERINC5Q86VE9 423 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 TFAP2CQ92754 450 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 CERS2Q96G23 380 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 SPATA13Q96N96 652 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 CORO1BQ9BR76 489 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 PAIP1Q9H074 479 aaKnown RBP19.27■□□□□ 0.68
CMTM3-201ENST00000361909 EBF1Q9UH73 591 aa19.27■□□□□ 0.68
CMTM3-201ENST00000361909 HTR3EA5X5Y0 456 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 M0QZ92 97 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 PIK3R2O00459 728 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 DNAJB1P25685 340 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 NSUN2Q08J23 767 aaKnown RBP eCLIP19.26■□□□□ 0.67
CMTM3-201ENST00000361909 LIPMQ5VYY2 423 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 CCDC80Q76M96 950 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 TMEM40Q8WWA1 233 aa19.26■□□□□ 0.67
CMTM3-201ENST00000361909 GATA5Q9BWX5 397 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-201ENST00000361909 TDRD1Q9BXT4 1180 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms