RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 SELPP16109 830 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 KLRC2P26717 231 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 GRK4P32298 578 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 PDK3Q15120 406 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ZCCHC8Q6NZY4 707 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 CYP2R1Q6VVX0 501 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MCOLN3Q8TDD5 553 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MAGEB10Q96LZ2 347 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 EBNA1BP2Q99848 306 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SNAP91O60641 907 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 PDE9AO76083 593 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 KCNH1O95259 989 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 IL12RB1P42701 662 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 NOMO3P69849 1222 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 BST1Q10588 318 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 USP41Q3LFD5 358 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 C11orf96Q7Z7L8 435 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 EDEM1Q92611 657 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 HGH1Q9BTY7 390 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 CEP41Q9BYV8 373 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ST6GALNAC4Q9H4F1 302 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SPAG4Q9NPE6 437 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 EFR3BQ9Y2G0 817 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MEIS2O14770 477 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 TSPAN9O75954 239 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 OR1E1P30953 314 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 CHKAP35790 457 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 CDH8P55286 799 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SPANXN2Q5MJ10 180 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 RNF148Q8N7C7 305 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 KAT5Q92993 513 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 MCRS1Q96EZ8 462 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
DNMT1-202ENST00000359526 A0A1W2PQ67 120 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 KCNK1O00180 336 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 S100A3P33764 101 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 RPS7P62081 194 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TRIQKQ629K1 86 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GLT6D1Q7Z4J2 308 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 CDK20Q8IZL9 346 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TSPAN14Q8NG11 270 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 LENG9Q96B70 501 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TRAFD1O14545 582 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 KRT36O76013 467 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 RPN2P04844 631 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ERVK-10P10266 1014 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GLRA2P23416 452 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ZBTB45Q96K62 511 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 MRPL57Q9BQC6 102 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 OSBPL11Q9BXB4 747 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 CATSPERZQ9NTU4 200 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 SNCAIPQ9Y6H5 919 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 QSOX1O00391 747 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 HDAC3O15379 428 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 MT-CO1P00395 513 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 CCDC130P13994 396 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 EPB42P16452 691 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 IFNGR2P38484 337 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 MAPK10P53779 464 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PSME3P61289 254 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 POLR2LP62875 67 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PRKCQQ04759 706 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 C16orf46Q6P387 395 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 CES3Q6UWW8 571 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF605Q86T29 641 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 C6orf62Q9GZU0 229 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 C8orf4Q9NR00 106 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 LEF1Q9UJU2 399 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 MLYCDO95822 493 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 HPCAL1P37235 193 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 APLP1P51693 650 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 IL2P60568 153 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 BROXQ5VW32 411 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PGBD3Q8N328 593 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms