RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 SLC25A41Q8N5S1 370 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 EXOC2Q96KP1 924 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 TGS1Q96RS0 853 aaKnown RBP12.83□□□□□ -0.36
GGPS1-202ENST00000358966 MRPL17Q9NRX2 175 aaKnown RBP12.83□□□□□ -0.36
GGPS1-202ENST00000358966 INSL5Q9Y5Q6 135 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 MYOFQ9NZM1 2061 aa12.83□□□□□ -0.36
GGPS1-202ENST00000358966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 STC2O76061 302 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TMCC1O94876 653 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 PRKCGP05129 697 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 MYOGP15173 224 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 NMBRP28336 390 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 C1QTNF8P60827 252 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 AFMIDQ63HM1 303 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 LVRNQ6Q4G3 990 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ARL14EPQ8N8R7 260 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 GBP7Q8N8V2 638 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 C2orf15Q8WU43 125 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ELAC2Q9BQ52 826 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SMG9Q9H0W8 520 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 EIF2B3Q9NR50 452 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 OLA1Q9NTK5 396 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 MOCS1Q9NZB8 636 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 HIDE1A8MVS5 230 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 MUSKO15146 869 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TGM5O43548 720 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ARHGEF15O94989 841 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 MT-ND3P03897 115 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 RHOQP17081 205 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 LAG3P18627 525 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 IRX4P78413 519 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SMARCB1Q12824 385 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TMED1Q13445 227 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 POLD3Q15054 466 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 NCCRP1Q6ZVX7 275 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 PGBD5Q8N414 524 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 IL12RB2Q99665 862 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 FRMD8Q9BZ67 464 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SP110Q9HB58 689 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TMEM248Q9NWD8 314 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 RAD54BQ9Y620 910 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 IGLV3-10A0A075B6K4 115 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 FAM159BA6NKW6 160 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 CCL22O00626 93 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 RAMP2O60895 175 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SUPT3HO75486 399 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ASMTLO95671 621 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 GSTA1P08263 222 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 GSTT1P30711 240 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 RFC2P35250 354 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 CD86P42081 329 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ERVFC1P60507 584 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 CDK16Q00536 496 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 PLOD1Q02809 727 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 NIPAL4Q0D2K0 466 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 HSP90AA5PQ58FG0 334 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 OR52E8Q6IFG1 317 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TMC7Q7Z402 723 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 DDX53Q86TM3 631 aaKnown RBP12.82□□□□□ -0.36
GGPS1-202ENST00000358966 DENND1AQ8TEH3 1009 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SLC22A17Q8WUG5 538 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 LRRC39Q96DD0 335 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TSGA13Q96PP4 275 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 FAM111AQ96PZ2 611 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 SLC2A6Q9UGQ3 507 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 TRHDEQ9UKU6 1024 aa12.82□□□□□ -0.36
GGPS1-202ENST00000358966 MIA3Q5JRA6 1907 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 F5H5T6 163 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 BMP1P13497 986 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 PGAM1P18669 254 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 SESN3P58005 492 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 COG7P83436 770 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 KLC1Q07866 573 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 RASSF3Q86WH2 238 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 CMTR2Q8IYT2 770 aaKnown RBP12.81□□□□□ -0.36
GGPS1-202ENST00000358966 UMODL1-AS1Q8N2C9 162 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 ACVR1CQ8NER5 493 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 TRAPPC9Q96Q05 1148 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 MECRQ9BV79 373 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 HERC2P3Q9BVR0 1158 aa12.81□□□□□ -0.36
GGPS1-202ENST00000358966 OXCT2Q9BYC2 517 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-202ENST00000358966 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms