RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ARIH1Q9Y4X5 557 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 RRN3P2A6NIE6 340 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SNNO75324 88 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MTRF1O75570 445 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HSDL1Q3SXM5 330 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 VWA5B1Q5TIE3 1220 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TSPYL5Q86VY4 417 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SNX32Q86XE0 403 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CENPLQ8N0S6 344 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 BHLHE22Q8NFJ8 381 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MYPNQ86TC9 1320 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SCELO95171 688 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SLC15A1P46059 708 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CRKP46108 304 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 PLET1Q6UQ28 207 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF597Q96LX8 424 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 PPP1R10Q96QC0 940 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 GON7Q9BXV9 100 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MROQ9BYG7 248 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 RAD18Q9NS91 495 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SSR3Q9UNL2 185 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ST3GAL5Q9UNP4 418 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CAPN8A6NHC0 703 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 FAM155AB1AL88 458 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TK2O00142 265 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 IL6P05231 212 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 L1CAMP32004 1257 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MRPS22P82650 360 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ANKS6Q68DC2 871 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 USP43Q70EL4 1123 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HERC6Q8IVU3 1022 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ACE2Q9BYF1 805 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ALG13Q9NP73 1137 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 LDOC1O95751 146 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 MIPP30301 263 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 RPS9P46781 194 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TXNL4AP83876 142 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CBWD6Q4V339 395 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ZC3H12BQ5HYM0 836 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CBWD3Q5JTY5 395 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CBWD5Q5RIA9 395 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF767PQ75MW2 155 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 EMC1Q8N766 993 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 STAG3L4Q8TBR4 150 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 VRTNQ9H8Y1 702 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SIX2Q9NPC8 291 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ARHGEF38Q9NXL2 777 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TRAF6Q9Y4K3 522 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 HPRP00739 348 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 NR3C2P08235 984 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 PSMA1P25786 263 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ACAP2Q15057 778 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 EARS2Q5JPH6 523 aaKnown RBP4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SH3BP5LQ7L8J4 393 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SNTG2Q9NY99 539 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SLC39A10Q9ULF5 831 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ASTN1O14525 1302 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 A0A0U1RQJ8 604 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC195A0A1B0GUA6 201 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 DPYSL4O14531 572 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 OATP04181 439 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 ECHS1P30084 290 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 TAZQ16635 292 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 DHRS4L2Q6PKH6 230 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 FAM47BQ8NA70 645 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 SH3KBP1Q96B97 665 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 VAV3Q9UKW4 847 aa4.15□□□□□ -1.74
SYNE2-204ENST00000358025 CITO14578 2027 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 M0QYV0 167 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ZBTB39O15060 712 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 HOXA10P31260 410 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PSME3P61289 254 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ECT2LQ008S8 904 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 DMC1Q14565 340 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 WDR36Q8NI36 951 aaKnown RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 IFT43Q96FT9 208 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 SNPHO15079 494 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PRMT3O60678 531 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PIGNO95427 931 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 STAT5AP42229 794 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 STAT5BP51692 787 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 QPRTQ15274 297 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 STEAP4Q687X5 459 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 TFAP2CQ92754 450 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 MAGIXQ9H6Y5 334 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 MAGED2Q9UNF1 606 aaPredicted RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 PRELID1Q9Y255 219 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 DDX39AO00148 427 aaKnown RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 KPNA6O60684 536 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 HTR1EP28566 365 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ASMTP46597 345 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 BTKQ06187 659 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ZYXQ15942 572 aaKnown RBP4.15□□□□□ -1.75
SYNE2-204ENST00000358025 FAM126BQ8IXS8 530 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ANGPTL6Q8NI99 470 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 CAPSLQ8WWF8 208 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 FGF4P08620 206 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 ETV6P41212 452 aa4.15□□□□□ -1.75
SYNE2-204ENST00000358025 HIPK4Q8NE63 616 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms