RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 ADAM30Q9UKF2 790 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PCDHA11Q9Y5I1 949 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 A0A0B4J269 797 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 SLC1A6P48664 564 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TBCDQ9BTW9 1192 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 EXOSC4Q9NPD3 245 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 ZNF229Q9UJW7 825 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 SLIT2O94813 1529 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 B2RBV5 119 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PCCBP05166 539 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TFE3P19532 575 aaPredicted RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 NME5P56597 212 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 TCEAL5Q5H9L2 206 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 R3HCC1LQ7Z5L2 792 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 LRRC39Q96DD0 335 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 MTFMTQ96DP5 389 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 AP5B1Q2VPB7 878 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 SLC25A52Q3SY17 297 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 IL12RB2Q99665 862 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 PLCH1Q4KWH8 1693 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 CHADO15335 359 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 KDELR1P24390 212 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 HOXC12P31275 282 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 ZNF621Q6ZSS3 439 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 SEMA3CQ99985 751 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 KCNS3Q9BQ31 491 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 RERGLQ9H628 205 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 ARVCFO00192 962 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PPP1R37O75864 691 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 KRT34O76011 436 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 STX4Q12846 297 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 ABHD15Q6UXT9 468 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PARGQ86W56 976 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 GALNT13Q8IUC8 556 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 KATNAL2Q8IYT4 538 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 SELENOMQ8WWX9 145 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 CAAP1Q9H8G2 361 aa11.1□□□□□ -0.63
FN1-205ENST00000357867 PRRC2BQ5JSZ5 2229 aaKnown RBP11.1□□□□□ -0.63
FN1-205ENST00000357867 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 SMIM31A0A1B0GVY4 71 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 BAIAP3O94812 1187 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 FGF1P05230 155 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 POU1F1P28069 291 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 HTR7P34969 479 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ARHGEF19Q8IW93 802 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 GALNT4Q8N4A0 578 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ZSCAN1Q8NBB4 408 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 TSC22D3Q99576 134 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ADPRHL2Q9NX46 363 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 PCDHAC2Q9Y5I4 1007 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 FSHRP23945 695 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 DNAJC3Q13217 504 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 INTS11Q5TA45 600 aaKnown RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 SYT12Q8IV01 421 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 MORC2Q9Y6X9 1032 aaPredicted RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 MIA3Q5JRA6 1907 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 MYO7AQ13402 2215 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 SNUPNO95149 360 aaKnown RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 UBE3AQ05086 875 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ACSM2AQ08AH3 577 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 TAF10Q12962 218 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 AGKQ53H12 422 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ACSM2BQ68CK6 577 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ZNF670Q9BS34 389 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 PACSIN1Q9BY11 444 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 HSD17B3P37058 310 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 FEN1P39748 380 aaKnown RBP11.09□□□□□ -0.63
FN1-205ENST00000357867 DEFA1P59665 94 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 DEFA3P59666 94 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 ATP13A4Q4VNC1 1196 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 KCNE2Q9Y6J6 123 aa11.09□□□□□ -0.63
FN1-205ENST00000357867 FAM187BQ17R55 369 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms