RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 STAMBPO95630 424 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 EDNRBP24530 442 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 MGAT1P26572 445 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 ICAM3P32942 547 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 GRIA1P42261 906 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 HALP42357 657 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 FLT3LGP49771 235 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
CAPN3-205ENST00000357568 GALNT2Q10471 571 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 SQLEQ14534 574 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 KIZQ2M2Z5 673 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 ZBTB49Q6ZSB9 765 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 HERC6Q8IVU3 1022 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 EXOC8Q8IYI6 725 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 SCAIQ8N9R8 606 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 LRTOMTQ8WZ04 291 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 SLCO4A1Q96BD0 722 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 NPLQ9BXD5 320 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-205ENST00000357568 TRIM15Q9C019 465 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
CAPN3-205ENST00000357568 SCHIP1Q9P0W5 487 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-205ENST00000357568 EBF1Q9UH73 591 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 GABRQQ9UN88 632 aa10.79□□□□□ -0.68
CAPN3-205ENST00000357568 MAGEB16A2A368 324 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 AQP12BA6NM10 295 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 H3BMQ9 156 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CYP2C9P11712 490 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 NAT1P18440 290 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 HOXD12P35452 270 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 ATP4BP51164 291 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SLC5A3P53794 718 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TMBIM6P55061 237 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 MPP1Q00013 466 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TFAMQ00059 246 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CAP1Q01518 475 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PRKCZQ05513 592 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 LRP8Q14114 963 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PSMD5Q16401 504 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 NRF1Q16656 503 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 C15orf59Q2T9L4 293 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 ITPRIPL1Q6GPH6 555 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 OR6B2Q6IFH4 312 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 OLFML1Q6UWY5 402 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CCDC80Q76M96 950 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TMEM135Q86UB9 458 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 AQP12AQ8IXF9 295 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PLD6Q8N2A8 252 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CENPSQ8N2Z9 138 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 STYXQ8WUJ0 223 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CENPIQ92674 756 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 USP13Q92995 863 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 COG8Q96MW5 612 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TSNARE1Q96NA8 513 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 C11orf84Q9BUA3 381 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 ACE2Q9BYF1 805 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 WDR55Q9H6Y2 383 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 LIN28AQ9H9Z2 209 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CXorf21Q9HAI6 301 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SPAG4Q9NPE6 437 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CNOT6Q9ULM6 557 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TRIM17Q9Y577 477 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 DDHD2O94830 711 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PIGNO95427 931 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PGK2P07205 417 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 MYL3P08590 195 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 DNAJB2P25686 324 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 GABRB3P28472 473 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 GBE1Q04446 702 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TUBA3CQ13748 450 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 MTX3Q5HYI7 312 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 FSTL4Q6MZW2 842 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 HMBOX1Q6NT76 420 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TTC33Q6PID6 262 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 MPZL3Q6UWV2 235 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 FRA10AC1Q70Z53 315 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 FAM47BQ8NA70 645 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 COLGALT1Q8NBJ5 622 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SLC45A3Q96JT2 553 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 NEURL2Q9BR09 285 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 CORO1BQ9BR76 489 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 GPATCH1Q9BRR8 931 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PAIP1Q9H074 479 aaKnown RBP10.78□□□□□ -0.68
CAPN3-205ENST00000357568 SYBUQ9NX95 663 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 TMEM181Q9P2C4 612 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 HESX1Q9UBX0 185 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 PACSIN3Q9UKS6 424 aa10.78□□□□□ -0.68
CAPN3-205ENST00000357568 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.68
CAPN3-205ENST00000357568 ANK1P16157 1881 aa10.77□□□□□ -0.68
CAPN3-205ENST00000357568 ERI2A8K979 691 aaKnown RBP10.77□□□□□ -0.69
CAPN3-205ENST00000357568 AP3B1O00203 1094 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms