RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TPSAB1Q15661 275 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SMAD1Q15797 465 aaKnown RBP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PSMD5Q16401 504 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CNPY1Q3B7I2 92 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 USP41Q3LFD5 358 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 MGAT5BQ3V5L5 792 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PGM2L1Q6PCE3 622 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ANKS3Q6ZW76 656 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 NUP93Q8N1F7 819 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SCML4Q8N228 414 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 FUBP3Q96I24 572 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRIM55-204ENST00000353317 C8orf48Q96LL4 319 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 SPATA16Q9BXB7 569 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CYP4F11Q9HBI6 524 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ZDHHC7Q9NXF8 308 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 GMIPQ9P107 970 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 CDH22Q9UJ99 828 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 FBXW11Q9UKB1 542 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 PSAT1Q9Y617 370 aa8.74□□□□□ -1.01
TRIM55-204ENST00000353317 ARHGEF37A1IGU5 675 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF195O14628 629 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 ALDH1A2O94788 518 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CSPG5O95196 566 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 KLHL2O95198 593 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 GJB5O95377 273 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SOD2P04179 222 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SPATA31D3P0C874 917 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 HAPLN1P10915 354 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CNTFP26441 200 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 PEX2P28328 305 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 IDH3AP50213 366 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 AQP4P55087 323 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 BTKQ06187 659 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 NIPAL4Q0D2K0 466 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SEMA3BQ13214 749 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 NFE2Q16621 373 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 PPM1JQ5JR12 505 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 STXBP5Q5T5C0 1151 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CASC4Q6P4E1 433 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SPATA31D4Q6ZUB0 917 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 ACAD11Q709F0 780 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CYS1Q717R9 158 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 C10orf107Q8IVU9 208 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CDKL3Q8IVW4 592 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 HIPK4Q8NE63 616 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 PGAP3Q96FM1 320 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 STN1Q9H668 368 aaKnown RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 TBC1D30Q9Y2I9 924 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SPTBN5Q9NRC6 3674 aaKnown RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 LOC100653049A0A140TA62 436 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 FAM92AA1XBS5 289 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 NRG2O14511 850 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 GLRA3O75311 464 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 KRT34O76011 436 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 FGBP02675 491 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 MYOGP15173 224 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 MAGEA11P43364 429 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CXCR3P49682 368 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 HTRA4P83105 476 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 DLG1Q12959 904 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 TAF10Q12962 218 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SEMA5AQ13591 1074 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 DBN1Q16643 649 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 TCHHL1Q5QJ38 904 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 NCBP2-AS2Q69YL0 99 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 FAM109BQ6ICB4 259 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 PACS1Q6VY07 963 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 FRMD7Q6ZUT3 714 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 MARK2Q7KZI7 788 aaKnown RBP8.73□□□□□ -1.01
TRIM55-204ENST00000353317 HPS6Q86YV9 775 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 ACTRT2Q8TDY3 377 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 IRGQQ8WZA9 623 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 ZNF558Q96NG5 402 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 YME1L1Q96TA2 773 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 TKTL2Q9H0I9 626 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 IL1RAPL1Q9NZN1 696 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 NEU3Q9UQ49 428 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 SCML2Q9UQR0 700 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 POMPQ9Y244 141 aa8.73□□□□□ -1.01
TRIM55-204ENST00000353317 CREB3O43889 395 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 LILRB3O75022 631 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ZMPSTE24O75844 475 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ABLIM3O94929 683 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 SERPINE1P05121 402 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 GRIA2P42262 883 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ELAVL2Q12926 359 aaKnown RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 MED21Q13503 144 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 STEAP4Q687X5 459 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 PDPK2PQ6A1A2 396 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 C4orf22Q6V702 233 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 CMTR2Q8IYT2 770 aaKnown RBP8.72□□□□□ -1.01
TRIM55-204ENST00000353317 DEFB107AQ8IZN7 70 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ACMSDQ8TDX5 336 aa8.72□□□□□ -1.01
TRIM55-204ENST00000353317 ARNTL2Q8WYA1 636 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms