RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 CRABP2P29373 138 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 AVPR1AP37288 418 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 GRIK1P39086 918 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 TUBP50607 506 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 EPHB1P54762 984 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 CTBP1Q13363 440 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 CEP97Q8IW35 865 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 AGR3Q8TD06 166 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SERPINB11Q96P15 392 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 TTC1Q99614 292 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 NMUR1Q9HB89 426 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 TBC1D13Q9NVG8 400 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 XPR1Q9UBH6 696 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 VTI1BQ9UEU0 232 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 PCDHB8Q9UN66 801 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SSX2IPQ9Y2D8 614 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 LOC100653049A0A140TA62 436 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 KRT34O76011 436 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 SLC1A2P43004 574 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 GLRBP48167 497 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 PGGT1BP53609 377 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 YWHAHQ04917 246 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-201ENST00000351487 CCNIQ14094 377 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 TMC7Q7Z402 723 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 APLFQ8IW19 511 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-201ENST00000351487 PDCD6IPQ8WUM4 868 aaKnown RBP22.4■■□□□ 1.18
UPF3A-201ENST00000351487 SPDL1Q96EA4 605 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 SLC2A6Q9UGQ3 507 aa22.4■■□□□ 1.18
UPF3A-201ENST00000351487 EIF4E1BA6NMX2 242 aaKnown RBP22.39■■□□□ 1.18
UPF3A-201ENST00000351487 GRID2O43424 1007 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 ADAMTS4O75173 837 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 ERFP50548 548 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 PAPOLAP51003 745 aaKnown RBP22.39■■□□□ 1.18
UPF3A-201ENST00000351487 NAGLUP54802 743 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 DSG1Q02413 1049 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 TBL3Q12788 808 aaKnown RBP22.39■■□□□ 1.18
UPF3A-201ENST00000351487 ZNF598Q86UK7 904 aaKnown RBP22.39■■□□□ 1.18
UPF3A-201ENST00000351487 TRIB2Q92519 343 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 C1orf74Q96LT6 269 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 CYP4F11Q9HBI6 524 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 ZFYVE28Q9HCC9 887 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 OSER1Q9NX31 292 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 POMPQ9Y244 141 aa22.39■■□□□ 1.18
UPF3A-201ENST00000351487 F8W810 466 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 BUD23O43709 281 aaKnown RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 DLX3O60479 287 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 PMPCBO75439 489 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 PDE5AO76074 875 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 TFEBP19484 476 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 PAX7P23759 505 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 ADSLP30566 484 aaPredicted RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 MTTPP55157 894 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 MLLT6P55198 1093 aaPredicted RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 NSUN2Q08J23 767 aaKnown RBP eCLIP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 ASPHQ12797 758 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 CNGA3Q16281 694 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 GSTA3Q16772 222 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 MFSD14CQ5VZR4 134 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 LSMEM2Q8N112 164 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 FBXW8Q8N3Y1 598 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 CPSF7Q8N684 471 aaKnown RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 UCMAQ8WVF2 138 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 LENG8Q96PV6 779 aaPredicted RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 TRPV6Q9H1D0 765 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 ZNF385DQ9H6B1 395 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 ARNT2Q9HBZ2 717 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 IPO11Q9UI26 975 aaKnown RBP22.39■■□□□ 1.17
UPF3A-201ENST00000351487 FRMPD3Q5JV73 1810 aa22.39■■□□□ 1.17
UPF3A-201ENST00000351487 A0A1W2PQH9 124 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 DPPA5A6NC42 116 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 CD151P48509 253 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 PEX6Q13608 980 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 LSM12Q3MHD2 195 aaKnown RBP22.38■■□□□ 1.17
UPF3A-201ENST00000351487 ZNF470Q6ECI4 717 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 MSANTD2Q6P1R3 559 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 KDELC1Q6UW63 502 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 IZUMO2Q6UXV1 221 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 KIAA0408Q6ZU52 694 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 DHDDSQ86SQ9 333 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 C14orf80Q86SX3 495 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 FATE1Q969F0 183 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 MOCOSQ96EN8 888 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 CCDC28BQ9BUN5 200 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 MRPL46Q9H2W6 279 aaKnown RBP22.38■■□□□ 1.17
UPF3A-201ENST00000351487 WDR55Q9H6Y2 383 aaPredicted RBP22.38■■□□□ 1.17
UPF3A-201ENST00000351487 MPP6Q9NZW5 540 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 A0A087X1B8 175 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 SNUPNO95149 360 aaKnown RBP22.38■■□□□ 1.17
UPF3A-201ENST00000351487 BAG2O95816 211 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 PEX11BO96011 259 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 LINGO3P0C6S8 592 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 THRAP10827 490 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 PIK3R1P27986 724 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 CCR10P46092 362 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 DLG1Q12959 904 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 ZNF460Q14592 562 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 TSTD2Q5T7W7 516 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 TMEM154Q6P9G4 183 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 ACAD11Q709F0 780 aa22.38■■□□□ 1.17
UPF3A-201ENST00000351487 NXNL1Q96CM4 212 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms