RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 APPL1Q9UKG1 709 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 MTF2Q9Y483 593 aaPredicted RBP18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 CRTAMO95727 393 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 MT-CO1P00395 513 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 F2P00734 622 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 SMIM18P0DKX4 95 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 HCAR3P49019 387 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 CDKL1Q00532 357 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 BIRC2Q13490 618 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ART3Q13508 389 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 MFSD10Q14728 455 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 SH2D4BQ5SQS7 431 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 IL31Q6EBC2 164 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 C16orf89Q6UX73 402 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 SCAMP5Q8TAC9 235 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 FAM95CA0A1B0GW59 222 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 CASTOR2A6NHX0 329 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ERI2A8K979 691 aaKnown RBP18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 KCNU1A8MYU2 1149 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ARCN1P48444 511 aaKnown RBP18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 CXCR3P49682 368 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 HEXDCQ8WVB3 486 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ELMO2Q96JJ3 720 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 LRGUKQ96M69 825 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 TSNARE1Q96NA8 513 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 EPAS1Q99814 870 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 PCDHAC1Q9H158 963 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 OCEL1Q9H607 264 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 ZBTB26Q9HCK0 441 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 CNGB3Q9NQW8 809 aa18.32■□□□□ 0.52
PTP4A3-202ENST00000349124 A0A1B0GTW7 788 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 ATP6V1B1P15313 513 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 BDNFP23560 247 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 SLC1A2P43004 574 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 ADAM17P78536 824 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 FRG1Q14331 258 aaKnown RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 PPP1R3AQ16821 1122 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 RBM20Q5T481 1227 aaKnown RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 OSBPL2Q9H1P3 480 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 RIMS3Q9UJD0 308 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 PEX1O43933 1283 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 PABPC4LP0CB38 370 aaKnown RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 TSPAN8P19075 237 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 LRPAP1P30533 357 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 RAB10P61026 200 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 RAB41Q5JT25 222 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 OLFML2BQ68BL8 750 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 IQSEC1Q6DN90 963 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 CPSF7Q8N684 471 aaKnown RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 NAT14Q8WUY8 206 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 SERPINI1Q99574 410 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 TBL1YQ9BQ87 522 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 GTSE1Q9NYZ3 720 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 PRPF19Q9UMS4 504 aaKnown RBP18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 SBF1O95248 1867 aa18.31■□□□□ 0.52
PTP4A3-202ENST00000349124 STRNO43815 780 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 RNASEH2AO75792 299 aaKnown RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 TFAP2AP05549 437 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 PIM1P11309 404 aaPredicted RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 XIAPP98170 497 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 CSHL1Q14406 222 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 PRPSAP1Q14558 356 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 PM20D1Q6GTS8 502 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 SPATA24Q86W54 205 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 ARHGAP12Q8IWW6 846 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 HASPINQ8TF76 798 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 SEMA6AQ9H2E6 1030 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 ADA2Q9NZK5 511 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 C6orf203Q9P0P8 240 aaPredicted RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 AP4B1Q9Y6B7 739 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 SDHDO14521 159 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 MSI1O43347 362 aaKnown RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 H2AFYO75367 372 aaKnown RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 STMN1P16949 149 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 AXLP30530 894 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 SEPT6Q14141 434 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 ADGRE1Q14246 886 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 PCSK7Q16549 785 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 PCID2Q5JVF3 399 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 ZNF470Q6ECI4 717 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 TRIM67Q6ZTA4 783 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 HMGCLL1Q8TB92 370 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 BTBD9Q96Q07 612 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 TMEM209Q96SK2 561 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 POMKQ9H5K3 350 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 TMLHEQ9NVH6 421 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 SFMBT1Q9UHJ3 866 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 GNEQ9Y223 722 aaKnown RBP18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 LZTS1Q9Y250 596 aa18.3■□□□□ 0.52
PTP4A3-202ENST00000349124 CCL22O00626 93 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ACOT8O14734 319 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 MTSS1O43312 755 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 MYL3P08590 195 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ME2P23368 584 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 PGAM4Q8N0Y7 254 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms