RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TCF4P15884 667 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 RECQLP46063 649 aaPredicted RBP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 C21orf59P57076 290 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 NXPH1P58417 271 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 TPI1P60174 286 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 NAPEPLDQ6IQ20 393 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 ERN2Q76MJ5 926 aaKnown RBP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 OR6K2Q8NGY2 324 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 RHBDD1Q8TEB9 315 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 ADAMTS14Q8WXS8 1223 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 TRIM11Q96F44 468 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 DHX35Q9H5Z1 703 aaKnown RBP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 ZDHHC6Q9H6R6 413 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 CATSPERBQ9H7T0 1116 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 PREBQ9HCU5 417 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 NENFQ9UMX5 172 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 LUC7L2Q9Y383 392 aaKnown RBP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 MSRB2Q9Y3D2 182 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 BZW2Q9Y6E2 419 aaKnown RBP14.68□□□□□ -0.06
HMGN3-202ENST00000344726 SCINQ9Y6U3 715 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 CFAP47Q6ZTR5 3102 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 EEF2KO00418 725 aaKnown RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 BUB1O43683 1085 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 RNGTTO60942 597 aaKnown RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 TMCC1O94876 653 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 TRIM16O95361 564 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 DESP17661 470 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 IL1R2P27930 398 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 YBEYP58557 167 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 SERINC3Q13530 473 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 PARS2Q7L3T8 475 aaKnown RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 ZNF354CQ86Y25 554 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 PLPP6Q8IY26 295 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 KLK6Q92876 244 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 IQCDQ96DY2 449 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 ELF4Q99607 663 aaPredicted RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 HDAC8Q9BY41 377 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 HPCAL4Q9UM19 191 aa14.67□□□□□ -0.06
HMGN3-202ENST00000344726 ZFR2Q9UPR6 939 aaKnown RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 GOLGA4Q13439 2230 aaKnown RBP14.67□□□□□ -0.06
HMGN3-202ENST00000344726 COL5A1P20908 1838 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 A0A1W2PQU0 124 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 TLR4O00206 839 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PRPSAP2O60256 369 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 RNF8O76064 485 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 GSRP00390 522 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 CAPNS1P04632 268 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 ADRB3P13945 408 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PRLRP16471 622 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 ITGB7P26010 798 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 HNRNPH3P31942 346 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 HTR7P34969 479 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PARP15Q460N3 678 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 TXNRD3NBQ6F5E7 133 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PRPF39Q86UA1 669 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 MARCH9Q86YJ5 346 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 KDF1Q8NAX2 398 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 TMEM145Q8NBT3 493 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 OR2AP1Q8NGE2 309 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 SAP25Q8TEE9 199 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 RNF25Q96BH1 459 aaPredicted RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PPP1R16AQ96I34 528 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 CELF6Q96J87 481 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 BTBD6Q96KE9 485 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 MYOCQ99972 504 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 TSPY26PQ9H489 355 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 PDFQ9HBH1 243 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 MRPL47Q9HD33 250 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 FZD3Q9NPG1 666 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 DYRK4Q9NR20 520 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 ZMIZ1Q9ULJ6 1067 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 TPX2Q9ULW0 747 aaKnown RBP14.66□□□□□ -0.06
HMGN3-202ENST00000344726 DMXL2Q8TDJ6 3036 aa14.66□□□□□ -0.06
HMGN3-202ENST00000344726 LAMA5O15230 3695 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ZSCAN5CA6NGD5 496 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 GOLGA8CPA6NN73 597 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 J3KR12 359 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SPINT1O43278 529 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 CYP1A2P05177 515 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ERCC2P18074 760 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 EPHA8P29322 1005 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 PCK1P35558 622 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ABL2P42684 1182 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 GRK6P43250 576 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 NEK3P51956 506 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SNRPD1P62314 119 aaKnown RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 BNIP3Q12983 259 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 FGL2Q14314 439 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SUZ12Q15022 739 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms