RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 EGFL7Q9UHF1 273 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 WARSP23381 471 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 PSMD5Q16401 504 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 ECM1Q16610 540 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 C15orf59Q2T9L4 293 aaPredicted RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 NADK2Q4G0N4 442 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 GK5Q6ZS86 529 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 ADCK2Q7Z695 626 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 DQX1Q8TE96 717 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 FAR1Q8WVX9 515 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 LPGAT1Q92604 370 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 ASB7Q9H672 318 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 WDR55Q9H6Y2 383 aaPredicted RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 TMCC2O75069 709 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 CYBBP04839 570 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 TMEM62Q0P6H9 643 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 PYDC2Q56P42 97 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 RALGPS1Q5JS13 557 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 THOC7Q6I9Y2 204 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 C12orf56Q8IXR9 622 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 PTGR2Q8N8N7 351 aaPredicted RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 RHOBTB2Q9BYZ6 727 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 DDX43Q9NXZ2 648 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 STOML2Q9UJZ1 356 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 TMEM59LQ9UK28 342 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 CARD8Q9Y2G2 431 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 RRN3P2A6NIE6 340 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 IDH2P48735 452 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 TXNRD3Q86VQ6 643 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 CLN6Q9NWW5 311 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 NR2E1Q9Y466 385 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 TNPO3Q9Y5L0 923 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 DGKBQ9Y6T7 804 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 LOC110117498-PIK3R3F6TDL0 507 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 H3BN98 237 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 BTN3A1O00481 513 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 S100A9P06702 114 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 HGFP14210 728 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 PSEN1P49768 467 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 WDR4P57081 412 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 PLCL1Q15111 1095 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 PFKFB4Q16877 469 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 DEFB106AQ8N104 65 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 RAB2BQ8WUD1 216 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 MYLPFQ96A32 169 aa18.25■□□□□ 0.51
SMC4-201ENST00000344722 CCDC59Q9P031 241 aaKnown RBP18.25■□□□□ 0.51
SMC4-201ENST00000344722 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.511e-7■■■■■ 165.2
SMC4-201ENST00000344722 UGT2B11O75310 529 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 EPN2O95208 641 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 HALP42357 657 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ARSHQ5FYA8 562 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 SNRNP25Q9BV90 132 aaKnown RBP18.24■□□□□ 0.51
SMC4-201ENST00000344722 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 C12orf65Q9H3J6 166 aaKnown RBP18.24■□□□□ 0.51
SMC4-201ENST00000344722 SLC7A8Q9UHI5 535 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CYB561D2O14569 222 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CCNYL2Q5T2Q4 361 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 SYT15Q9BQS2 421 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 PCDH12Q9NPG4 1184 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 MAPRE3Q9UPY8 281 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 MLYCDO95822 493 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CCNE2O96020 404 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 PRKAR1AP10644 381 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
SMC4-201ENST00000344722 MPSTP25325 297 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CDC73Q6P1J9 531 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 RAB43Q86YS6 212 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CLYBLQ8N0X4 340 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 GRPEL2Q8TAA5 225 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 OMDQ99983 421 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ADGRE3Q9BY15 652 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 TBCCD1Q9NVR7 557 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 GNPTGQ9UJJ9 305 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 LSM7Q9UK45 103 aaKnown RBP18.24■□□□□ 0.51
SMC4-201ENST00000344722 DSEQ9UL01 958 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 NID2Q14112 1375 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CDH8P55286 799 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ELMSAN1Q6PJG2 1045 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ANKS1BQ7Z6G8 1248 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 CYP4X1Q8N118 509 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 Q96MT0 163 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 ATP6V1HQ9UI12 483 aa18.24■□□□□ 0.51
SMC4-201ENST00000344722 LINGO3P0C6S8 592 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 OLR1P78380 273 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 ADIGQ0VDE8 80 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 NFIAQ12857 509 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 ITPK1Q13572 414 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 GANCQ8TET4 914 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 AP3S1Q92572 193 aa18.23■□□□□ 0.51
SMC4-201ENST00000344722 CENPNQ96H22 339 aaPredicted RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 LENG8Q96PV6 779 aaPredicted RBP18.23■□□□□ 0.51
SMC4-201ENST00000344722 TRMOQ9BU70 441 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms