RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ING2Q9H160 280 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 SAE1Q9UBE0 346 aaPredicted RBP16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 INSL5Q9Y5Q6 135 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 PPEF2O14830 753 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 MAGEC1O60732 1142 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 ADRA1DP25100 572 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 SLC20A2Q08357 652 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 MMRN1Q13201 1228 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 MAD2L1Q13257 205 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 SOWAHAQ2M3V2 549 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 VPS45Q9NRW7 570 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 PMM2O15305 246 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 INPP4BO15327 924 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 PAGE2BQ5JRK9 111 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 ZSCAN18Q8TBC5 510 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 NEUROG2Q9H2A3 272 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 WNT6Q9Y6F9 365 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 TMEM114B3SHH9 223 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 FKBP9O95302 570 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 RB1P06400 928 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 CRY1Q16526 586 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 ATP13A4Q4VNC1 1196 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 SEL1L3Q68CR1 1132 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 FKBP9P1Q75LS8 142 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 PRCCQ92733 491 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 FAM162AQ96A26 154 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 MYO19Q96H55 970 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 ZDHHC4Q9NPG8 344 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 ADAMTS5Q9UNA0 930 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 DTNAQ9Y4J8 743 aa16.58■□□□□ 0.24
SMARCA4-201ENST00000344626 SKAP2O75563 359 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 ADSSP30520 456 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 INPP1P49441 399 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 HSPA14Q0VDF9 509 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 GALNTL6Q49A17 601 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 OR56A4Q8NGH8 313 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 CAVIN3Q969G5 261 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 STOML1Q9UBI4 398 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 GNEQ9Y223 722 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 TNPO3Q9Y5L0 923 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 BMPR2Q13873 1038 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 DET1Q7L5Y6 550 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 ASB2Q96Q27 587 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 ACOX2Q99424 681 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 SLC39A8Q9C0K1 460 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 C10orf88Q9H8K7 445 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 BPIFA1Q9NP55 256 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 GJD2Q9UKL4 321 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 GNSP15586 552 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 CDH2P19022 906 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 FAM45BPQ6NSW5 357 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 FAM45AQ8TCE6 357 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 MAGEH1Q9H213 219 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 PNMA8BQ9ULN7 279 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 ERVW-1Q9UQF0 538 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 EFR3BQ9Y2G0 817 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 MYH2Q9UKX2 1941 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 RIPK2O43353 540 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 MLNP12872 115 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 DAOAP59103 153 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 CDC16Q13042 620 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 TEAD4Q15561 434 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 JADE3Q92613 823 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 GTPBP2Q9BX10 602 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 TNKS2Q9H2K2 1166 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 ERVK-5Q9HDB9 667 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 POLG2Q9UHN1 485 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 EVLQ9UI08 416 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 AURKCQ9UQB9 309 aa16.57■□□□□ 0.24
SMARCA4-201ENST00000344626 A0A096LPK6 155 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 BTN3A1O00481 513 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 CES3Q6UWW8 571 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 NAF1Q96HR8 494 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 MCCC1Q96RQ3 725 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 PCDHB18PQ96TA0 734 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 TSHRP16473 764 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 PEX5P50542 639 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 DEFB103AP81534 67 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 VITQ6UXI7 678 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 AGMOQ6ZNB7 445 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 KXD1Q9BQD3 176 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 NSUN3Q9H649 340 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 LRRC19Q9H756 370 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 KCNU1A8MYU2 1149 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 CXCR2P25025 360 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 CHI3L1P36222 383 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 FLT3P36888 993 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 GPR17Q13304 367 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 STXBP5Q5T5C0 1151 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 UBE2E3Q969T4 207 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 MAGEB18Q96M61 343 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
SMARCA4-201ENST00000344626 MIEF1Q9NQG6 463 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms