RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDC42-202ENST00000344548 CKAP2Q8WWK9 683 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 SMIM14Q96QK8 99 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 KIFC1Q9BW19 673 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 FSD1LQ9BXM9 530 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 ACE2Q9BYF1 805 aaPredicted RBP13.76□□□□□ -0.21
CDC42-202ENST00000344548 CCDC134Q9H6E4 229 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 ATP13A1Q9HD20 1204 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 MYOFQ9NZM1 2061 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 TCP11X1B4DZS4 312 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 SNRPAP09012 282 aaKnown RBP13.76□□□□□ -0.21
CDC42-202ENST00000344548 TNK2Q07912 1038 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 MGAT5Q09328 741 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 MTA1Q13330 715 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 TMCO4Q5TGY1 634 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 CCNJLQ8IV13 435 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 CHMP6Q96FZ7 201 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 ATXN7L3BQ96GX2 97 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 NAT9Q9BTE0 207 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 SENP1Q9P0U3 644 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
CDC42-202ENST00000344548 C5orf67F2Z3F1 127 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 KDELR3O43731 214 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ALDOAP04075 364 aaKnown RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 SLC7A9P82251 487 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 MPP3Q13368 585 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 CYTH1Q15438 398 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 TEAD2Q15562 447 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 PKN3Q6P5Z2 889 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 LVRNQ6Q4G3 990 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 TPGS1Q6ZTW0 290 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 RASSF3Q86WH2 238 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 ASAH2Q9NR71 780 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 OR51B4Q9Y5P0 310 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 MIA3Q5JRA6 1907 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ILVBLA1L0T0 632 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 LEFTY2O00292 366 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 PSMD3O43242 534 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 MT-CO1P00395 513 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 CNGA3Q16281 694 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 CHST9Q7L1S5 443 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 FAM217AQ8IXS0 508 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 APCDD1Q8J025 514 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ALG14Q96F25 216 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 SLC13A1Q9BZW2 595 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 MUC3BQ9H195 1237 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
CDC42-202ENST00000344548 NKIRAS1Q9NYS0 192 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 ZFATQ9P243 1243 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 KCTD3Q9Y597 815 aa13.75□□□□□ -0.21
CDC42-202ENST00000344548 E2F8A0AVK6 867 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 H0Y626 953 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 CCL22O00626 93 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 PIRTP0C851 137 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 TAC1P20366 129 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ARCN1P48444 511 aaKnown RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 NEK3P51956 506 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 OXCT1P55809 520 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ZNF235Q14590 738 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 PTPRCAPQ14761 206 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 CBX2Q14781 532 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 PTPRRQ15256 657 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 SIRPB2Q5JXA9 342 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 GPR158Q5T848 1215 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 HTR3DQ70Z44 454 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 SETD3Q86TU7 594 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 KCNMB4Q86W47 210 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ZSWIM3Q96MP5 696 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 LBHD1Q9BQE6 289 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 ARNT2Q9HBZ2 717 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 FGFR1OP2Q9NVK5 253 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 SMG5Q9UPR3 1016 aaKnown RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 LOC285095A0A1B0GVY8 99 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 K7ERQ8 282 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 LPXNO60711 386 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 KRT37O76014 449 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 VAPBO95292 243 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 RHOP08100 348 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
CDC42-202ENST00000344548 GABRB3P28472 473 aa13.74□□□□□ -0.21
CDC42-202ENST00000344548 CSKP41240 450 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms