RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 OR6K2Q8NGY2 324 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 NUP85Q9BW27 656 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 DEF6Q9H4E7 631 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ARHGAP20Q9P2F6 1191 aa16.34■□□□□ 0.21
ATG4B-201ENST00000344376 UBA2Q9UBT2 640 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-201ENST00000344376 ASCC3Q8N3C0 2202 aaKnown RBP16.33■□□□□ 0.2
ATG4B-201ENST00000344376 SPAARA0A1B0GVQ0 90 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 A0A1W2PQU0 124 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 A0A1W2PR77 199 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 H0Y8X5 98 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 H3BRJ5 948 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 CYP1A2P05177 515 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 ARL4AP40617 200 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 OVGP1Q12889 678 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 FOXC1Q12948 553 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 TRIP6Q15654 476 aaKnown RBP16.33■□□□□ 0.2
ATG4B-201ENST00000344376 MYLK3Q32MK0 819 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 IQCHQ86VS3 1027 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 ZSCAN30Q86W11 494 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 HORMAD1Q86X24 394 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 MFSD2AQ8NA29 543 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 CELF6Q96J87 481 aaKnown RBP16.33■□□□□ 0.2
ATG4B-201ENST00000344376 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
ATG4B-201ENST00000344376 MYO1FO00160 1098 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 TLR4O00206 839 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 YKT6O15498 198 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 WNT1P04628 370 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 ERCC2P18074 760 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 AKT2P31751 481 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
ATG4B-201ENST00000344376 HCAR3P49019 387 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 SHC2P98077 582 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 ZNF805Q5CZA5 627 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 KCNT1Q5JUK3 1230 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 ATXN7L2Q5T6C5 722 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-201ENST00000344376 KIAA1161Q6NSJ0 714 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 CYP4V2Q6ZWL3 525 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-201ENST00000344376 PARS2Q7L3T8 475 aaKnown RBP16.32■□□□□ 0.2
ATG4B-201ENST00000344376 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 OXR1Q8N573 874 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 NIPA2Q8N8Q9 360 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 RAB7BQ96AH8 199 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 ARHGEF26Q96DR7 871 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 CAMK1GQ96NX5 476 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 ELF4Q99607 663 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-201ENST00000344376 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 KLC2Q9H0B6 622 aa16.32■□□□□ 0.2
ATG4B-201ENST00000344376 NEMP1O14524 444 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 KCNK3O14649 394 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 AP1G1O43747 822 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 TRIM16O95361 564 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 UGT2B4P06133 528 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-201ENST00000344376 NXPH1P58417 271 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 RPS21P63220 83 aaKnown RBP16.31■□□□□ 0.2
ATG4B-201ENST00000344376 DPYSL2Q16555 572 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 SMTNL2Q2TAL5 461 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 LZTR1Q8N653 840 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 CTNNBL1Q8WYA6 563 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-201ENST00000344376 HSPH1Q92598 858 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 FEM1CQ96JP0 617 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 CDC6Q99741 560 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 SP110Q9HB58 689 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATG4B-201ENST00000344376 PCOLCE2Q9UKZ9 415 aa16.31■□□□□ 0.2
ATG4B-201ENST00000344376 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 C16orf96A6NNT2 1141 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 RNF103O00237 685 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 DFFAO00273 331 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 WNT9AO14904 365 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 SLC31A1O15431 190 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 PRAMEF11O60813 436 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 PRLRP16471 622 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
ATG4B-201ENST00000344376 GKP32189 559 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 GRK6P43250 576 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 SSR1P43307 286 aaKnown RBP16.3■□□□□ 0.2
ATG4B-201ENST00000344376 PAPOLAP51003 745 aaKnown RBP16.3■□□□□ 0.2
ATG4B-201ENST00000344376 GRM3Q14832 879 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 ZNF284Q2VY69 593 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 GDPD4Q6W3E5 623 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-201ENST00000344376 RHBDD1Q8TEB9 315 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 TEKT4Q8WW24 435 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 KLHL32Q96NJ5 620 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 SLC39A8Q9C0K1 460 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
ATG4B-201ENST00000344376 CTTNBP2NLQ9P2B4 639 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 FADS3Q9Y5Q0 445 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 CHD5Q8TDI0 1954 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 PLXNA2O75051 1894 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 SSU72P8A0A1W2PR75 194 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 TSPAN6O43657 245 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 AKR1B10O60218 316 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 H2AFZP0C0S5 128 aa16.3■□□□□ 0.2
ATG4B-201ENST00000344376 IL1R2P27930 398 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms