RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 C5orf22Q49AR2 442 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 HIST2H2BCQ6DN03 193 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 RRAGAQ7L523 313 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 PPM1KQ8N3J5 372 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 LMO3Q8TAP4 145 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 BTN2A2Q8WVV5 523 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 GLMNQ92990 594 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 CCDC114Q96M63 670 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 GFM1Q96RP9 751 aaKnown RBP16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 SIRPGQ9P1W8 387 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 SEPT3Q9UH03 358 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 USP25Q9UHP3 1055 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 ACTL7AQ9Y615 435 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 ICE1Q9Y2F5 2266 aa16.68■□□□□ 0.26
NECTIN1-202ENST00000340882 I6L893 689 aaPredicted RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 PAGE1O75459 146 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CLDN11O75508 207 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 RPLP0P05388 317 aaKnown RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 RHOCP08134 193 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 ZSCAN22P10073 491 aaPredicted RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CMA1P23946 247 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 ITGB7P26010 798 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 L1CAMP32004 1257 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CCR1P32246 355 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 IGFALSP35858 605 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 ACADSBP45954 432 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 NDUFA8P51970 172 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CDH4P55283 916 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 KRT83P78385 493 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 FOXK1P85037 733 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 EIF3IQ13347 325 aaKnown RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 PKP1Q13835 747 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 DTX1Q86Y01 620 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CCDC47Q96A33 483 aaKnown RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 NT5C1BQ96P26 610 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 PSMG3-AS1Q96PY0 264 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 CPEB1Q9BZB8 566 aaKnown RBP16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 THAP9Q9H5L6 903 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 LOXL2Q9Y4K0 774 aa16.67■□□□□ 0.26
NECTIN1-202ENST00000340882 C9orf172C9J069 976 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 AP1G1O43747 822 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 GRAP2O75791 330 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 JMJD7P0C870 316 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 SLC2A3P11169 496 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 GKP32189 559 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 CCKBRP32239 447 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 FMO5P49326 533 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 SGCGQ13326 291 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ARTNQ5T4W7 220 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 FAXCQ5TGI0 409 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ESRP1Q6NXG1 681 aaKnown RBP16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ZNF683Q8IZ20 524 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 OR7D4Q8NG98 312 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 PCDH19Q8TAB3 1148 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 USP7Q93009 1102 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 VOPP1Q96AW1 172 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 CENPTQ96BT3 561 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 KREMEN1Q96MU8 473 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 SLC2A13Q96QE2 648 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 C2orf49Q9BVC5 232 aaPredicted RBP16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 STRADBQ9C0K7 418 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ACP6Q9NPH0 428 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 DACH1Q9UI36 760 aa16.66■□□□□ 0.26
NECTIN1-202ENST00000340882 ANKRD36A6QL64 1941 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 TEP1Q99973 2627 aaKnown RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SLC16A3O15427 465 aaKnown RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 PRCPP42785 496 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SYKP43405 635 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 CDK17Q00537 523 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 NME3Q13232 169 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 MORC3Q14149 939 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 C4orf17Q53FE4 359 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 OTUD1Q5VV17 481 aaPredicted RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 ANKRD40Q6AI12 368 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 TMPRSS9Q7Z410 1059 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 ARL10Q8N8L6 244 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 DCAF4L2Q8NA75 395 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 STK32AQ8WU08 396 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 JPH3Q8WXH2 748 aaPredicted RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 TRIM62Q9BVG3 475 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SLC12A9Q9BXP2 914 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SLC13A1Q9BZW2 595 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 METTL14Q9HCE5 456 aaKnown RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 MBNL1Q9NR56 388 aaKnown RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 SPTBN1Q01082 2364 aaKnown RBP16.65■□□□□ 0.26
NECTIN1-202ENST00000340882 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 ZMPSTE24O75844 475 aa16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 ADCY5O95622 1261 aa16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 CLCN6P51797 869 aa16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 CCNHP51946 323 aaPredicted RBP16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 THOP1P52888 689 aa16.64■□□□□ 0.25
NECTIN1-202ENST00000340882 MAPK10P53779 464 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms