RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 Q8N9G6 341 aaPredicted RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 RCBTB1Q8NDN9 531 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 ART4Q93070 314 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 BMFQ96LC9 184 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 DDA1Q9BW61 102 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 MUC3BQ9H195 1237 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 SIRPGQ9P1W8 387 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 AGAP1Q9UPQ3 857 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 OSGIN2Q9Y236 505 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 MZF1P28698 734 aaPredicted RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 AKT2P31751 481 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 SCNN1AP37088 669 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 EIF2B5Q13144 721 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 CALCRLQ16602 461 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 Q6ZS46 218 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 RD3Q7Z3Z2 195 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 LIMS2Q7Z4I7 341 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 SYT2Q8N9I0 419 aaPredicted RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 PNPLA2Q96AD5 504 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 BICD1Q96G01 975 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 SLC25A23Q9BV35 468 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 LRRC61Q9BV99 259 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 CLPBQ9H078 707 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 TMEM63CQ9P1W3 806 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 ADAM21Q9UKJ8 722 aa11.47□□□□□ -0.57
ATXN3-201ENST00000340660 AGO1Q9UL18 857 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 PCDHGA9Q9Y5G4 932 aaKnown RBP11.47□□□□□ -0.57
ATXN3-201ENST00000340660 VWA3AA6NCI4 1184 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 POM121BA6NF01 834 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 A6NNZ2 444 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 TTC34A8MYJ7 566 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 SGSM2O43147 1006 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 SLC7A4O43246 635 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 KCNAB3O43448 404 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 LRCH4O75427 683 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 IL1BP01584 269 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ANXA6P08133 673 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 PLCG1P19174 1290 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.57
ATXN3-201ENST00000340660 CORO1AP31146 461 aaKnown RBP11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ACOT2P49753 483 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 TAS2R38P59533 333 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ABHD18Q0P651 414 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 SEMA5AQ13591 1074 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ZNF284Q2VY69 593 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 FJX1Q86VR8 437 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 DCP2Q8IU60 420 aaKnown RBP11.46□□□□□ -0.57
ATXN3-201ENST00000340660 CPXM2Q8N436 756 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 C1orf127Q8N9H9 656 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 AIFM3Q96NN9 605 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 BARD1Q99728 777 aaKnown RBP11.46□□□□□ -0.57
ATXN3-201ENST00000340660 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 KRTAP4-8Q9BYQ9 185 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ELOVL4Q9GZR5 314 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 LACRTQ9GZZ8 138 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 AKAP7Q9P0M2 348 aaPredicted RBP11.46□□□□□ -0.57
ATXN3-201ENST00000340660 SPASTQ9UBP0 616 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 ZNF510Q9Y2H8 683 aa11.46□□□□□ -0.57
ATXN3-201ENST00000340660 A0A1W2PQU0 124 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 LINC01387J3KSC0 135 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 POLR2EP19388 210 aaKnown RBP11.45□□□□□ -0.58
ATXN3-201ENST00000340660 NFKBIAP25963 317 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 RPA1P27694 616 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 HNRNPH3P31942 346 aaKnown RBP11.45□□□□□ -0.58
ATXN3-201ENST00000340660 CD70P32970 193 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 IST1P53990 364 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 GNL2Q13823 731 aaKnown RBP11.45□□□□□ -0.58
ATXN3-201ENST00000340660 LRP8Q14114 963 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 GALNT17Q6IS24 598 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 ST6GALNAC3Q8NDV1 305 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 FOXC2Q99958 501 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 B3GNT5Q9BYG0 378 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 APOBEC3BQ9UH17 382 aaKnown RBP11.45□□□□□ -0.58
ATXN3-201ENST00000340660 KCNJ14Q9UNX9 436 aa11.45□□□□□ -0.58
ATXN3-201ENST00000340660 A6NCN8 305 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 RNF212BA8MTL3 300 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 C19orf84I3L1E1 186 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 HGSO14964 777 aaPredicted RBP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 DPM1O60762 260 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 IFNAR1P17181 557 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 STAT5AP42229 794 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 LIG4P49917 911 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 CNTN1Q12860 1018 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 CPZQ66K79 652 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 ANKS6Q68DC2 871 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 SLC39A4Q6P5W5 647 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 KLHDC10Q6PID8 442 aa11.44□□□□□ -0.58
ATXN3-201ENST00000340660 KYAT3Q6YP21 454 aaKnown RBP11.44□□□□□ -0.58
ATXN3-201ENST00000340660 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms