RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CDH18Q13634 790 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 CYTH1Q15438 398 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 CES5AQ6NT32 575 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 PKN3Q6P5Z2 889 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MFN1Q8IWA4 741 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MAB21L3Q8N8X9 362 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 RAB3IL1Q8TBN0 382 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SUSD6Q92537 303 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 DNASE1L2Q92874 299 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MRGPRX2Q96LB1 330 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 CPNE1Q99829 537 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ADGRE3Q9BY15 652 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 POPDC3Q9HBV1 291 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MPP6Q9NZW5 540 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ZC3H7BQ9UGR2 993 aaKnown RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 TCAF1Q9Y4C2 921 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SNX10Q9Y5X0 201 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ANKRD36A6QL64 1941 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SCN8AQ9UQD0 1980 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ANHXE9PGG2 379 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SLC7A4O43246 635 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 HTRA2O43464 458 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 IGSF6O95976 241 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 APRTP07741 180 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 GSTA1P08263 222 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SLC26A3P40879 764 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ELK3P41970 407 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MAGEA12P43365 314 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 NRIP1P48552 1158 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 GPX6P59796 221 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MSLNQ13421 630 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 CRY1Q16526 586 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 INSCQ1MX18 579 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 EML3Q32P44 896 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 PLEKHG6Q3KR16 790 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ATAT1Q5SQI0 421 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 LYPLAL1Q5VWZ2 237 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 RNF219Q5W0B1 726 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SRLQ86TD4 932 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 PRPF39Q86UA1 669 aaKnown RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 NPAS3Q8IXF0 933 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 GSPT2Q8IYD1 628 aaKnown RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 ZBED8Q8IZ13 594 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 ARNTL2Q8WYA1 636 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 GDAP1L1Q96MZ0 367 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 MCMBPQ9BTE3 642 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 TREX1Q9NSU2 369 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SLC8A2Q9UPR5 921 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 GOLGA6L7A0A1B0GV03 622 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 SHOX2O60902 331 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 OGNP20774 298 aaKnown RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 FCARP24071 287 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 NAA20P61599 178 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 TRIP13Q15645 432 aaPredicted RBP7.27□□□□□ -1.25
NUP43-201ENST00000340413 DENND5AQ6IQ26 1287 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ADGRD2Q7Z7M1 963 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 ETFBKMTQ8IXQ9 262 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 STON2Q8WXE9 905 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 TCF12Q99081 682 aa7.27□□□□□ -1.25
NUP43-201ENST00000340413 RGS16O15492 202 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 KRT38O76015 456 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CRTAMO95727 393 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 IL1BP01584 269 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CISD3P0C7P0 127 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SNRPD1P62314 119 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 ARF5P84085 180 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CDK18Q07002 472 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SLC5A9Q2M3M2 681 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 PITRM1Q5JRX3 1037 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 CEP85LQ5SZL2 805 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 BBS7Q8IWZ6 715 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUP43-201ENST00000340413 FAM76AQ8TAV0 307 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 STYXQ8WUJ0 223 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 OXNAD1Q96HP4 312 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 MAGEE1Q9HCI5 957 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 GKN1Q9NS71 199 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 GGA2Q9UJY4 613 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 ANKRD6Q9Y2G4 727 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 TM9SF1O15321 606 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 HMBSP08397 361 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 COL6A2P12110 1019 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 MYOGP15173 224 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 TNFRSF4P43489 277 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 WNT3AP56704 352 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 RAD51Q06609 339 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 TAF1AQ15573 450 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 LONRF1Q17RB8 773 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 KRT71Q3SY84 523 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 RNF187Q5TA31 235 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 SYCE2Q6PIF2 218 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 RGS9BPQ6ZS82 235 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 OTOP3Q7RTS5 596 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 GRASPQ7Z6J2 395 aaPredicted RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 PDCD7Q8N8D1 485 aaKnown RBP7.26□□□□□ -1.25
NUP43-201ENST00000340413 BRSK1Q8TDC3 778 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 ECHDC3Q96DC8 303 aa7.26□□□□□ -1.25
NUP43-201ENST00000340413 SLC22A12Q96S37 553 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms