RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 TTC17Q96AE7 1141 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 MFSD3Q96ES6 412 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ZNF778Q96MU6 729 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 PSKH2Q96QS6 385 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 POLR1EQ9GZS1 481 aaKnown RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 SOX13Q9UN79 622 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ACTL7BQ9Y614 415 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 FAM237BA0A1B0GVD1 139 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 USP1O94782 785 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 PAPLNO95428 1278 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 POLBP06746 335 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 NR1H3Q13133 447 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 CDH18Q13634 790 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 CYTH1Q15438 398 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ANKRD20A4Q4UJ75 823 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 SPANXN3Q5MJ09 141 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 SLC26A11Q86WA9 606 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ING5Q8WYH8 240 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ZNF669Q96BR6 464 aaPredicted RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 CNOT10Q9H9A5 744 aaKnown RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 ARNT2Q9HBZ2 717 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 TDP1Q9NUW8 608 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 TYW5A2RUC4 315 aaKnown RBP21.48■■□□□ 1.03
VRK2-201ENST00000340157 AP3B1O00203 1094 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 BRAFP15056 766 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 CHN1P15882 459 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 KRT15P19012 456 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 MSLNQ13421 630 aaPredicted RBP21.48■■□□□ 1.03
VRK2-201ENST00000340157 SMAD1Q15797 465 aaKnown RBP21.48■■□□□ 1.03
VRK2-201ENST00000340157 MPP7Q5T2T1 576 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 LINGO4Q6UY18 593 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 MFN1Q8IWA4 741 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 ITFG1Q8TB96 612 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 KIFC1Q9BW19 673 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 SEPT3Q9UH03 358 aa21.48■■□□□ 1.03
VRK2-201ENST00000340157 TMEM120BA0PK00 339 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 SOBPA7XYQ1 873 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 INHBAP08476 426 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 CR2P20023 1033 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 NMBRP28336 390 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 RFTN1Q14699 578 aaPredicted RBP21.47■■□□□ 1.03
VRK2-201ENST00000340157 CBX2Q14781 532 aaPredicted RBP21.47■■□□□ 1.03
VRK2-201ENST00000340157 POU6F1Q14863 301 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 ZNF77Q15935 545 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 MPPE1Q53F39 396 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 FYB2Q5VWT5 728 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 TRABDQ9H4I3 376 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 DPP7Q9UHL4 492 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 ZNF180Q9UJW8 692 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 FAM169AQ9Y6X4 670 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 RFXAPO00287 272 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 ERVK-10P10266 1014 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 TMC5Q6UXY8 1006 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 CCDC117Q8IWD4 279 aaPredicted RBP21.47■■□□□ 1.03
VRK2-201ENST00000340157 APCDD1Q8J025 514 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 SMG7Q92540 1137 aaKnown RBP21.47■■□□□ 1.03
VRK2-201ENST00000340157 CERS2Q96G23 380 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 CINPQ9BW66 212 aaPredicted RBP21.47■■□□□ 1.03
VRK2-201ENST00000340157 LMAN2LQ9H0V9 348 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 VPS51Q9UID3 782 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 VPS28Q9UK41 221 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 SZT2Q5T011 3432 aa21.47■■□□□ 1.03
VRK2-201ENST00000340157 LOC285095A0A1B0GVY8 99 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 HMX2A2RU54 273 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 ATXN1LP0C7T5 689 aaKnown RBP21.46■■□□□ 1.03
VRK2-201ENST00000340157 USP4Q13107 963 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 FRG1Q14331 258 aaKnown RBP21.46■■□□□ 1.03
VRK2-201ENST00000340157 MARK2Q7KZI7 788 aaKnown RBP21.46■■□□□ 1.03
VRK2-201ENST00000340157 C4orf33Q8N1A6 199 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 SLC25A41Q8N5S1 370 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.46■■□□□ 1.03
VRK2-201ENST00000340157 ATXN2LQ8WWM7 1075 aaKnown RBP21.46■■□□□ 1.03
VRK2-201ENST00000340157 EXOC2Q96KP1 924 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 MSRAQ9UJ68 235 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 PSAT1Q9Y617 370 aa21.46■■□□□ 1.03
VRK2-201ENST00000340157 PRRC2BQ5JSZ5 2229 aaKnown RBP21.45■■□□□ 1.03
VRK2-201ENST00000340157 MAGEB16A2A368 324 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 CCDC78A2IDD5 438 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 LMAN2Q12907 356 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 SLC1A5Q15758 541 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 RAB30Q15771 203 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 PCID2Q5JVF3 399 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 PKN3Q6P5Z2 889 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 ARID3BQ8IVW6 561 aaPredicted RBP21.45■■□□□ 1.02
VRK2-201ENST00000340157 DCAF4L2Q8NA75 395 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 ATP2A3Q93084 1043 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 LMLNQ96KR4 655 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 NOD2Q9HC29 1040 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 PPANQ9NQ55 473 aaKnown RBP21.45■■□□□ 1.02
VRK2-201ENST00000340157 MRPS23Q9Y3D9 190 aaKnown RBP21.45■■□□□ 1.02
VRK2-201ENST00000340157 IKBKGQ9Y6K9 419 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 TNRC18O15417 2968 aaPredicted RBP21.45■■□□□ 1.02
VRK2-201ENST00000340157 TMCC1O94876 653 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 CD70P32970 193 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 LSP1P33241 339 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 MGAT5Q09328 741 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 SIRPB2Q5JXA9 342 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 TMEM25Q86YD3 366 aa21.45■■□□□ 1.02
VRK2-201ENST00000340157 RNF135Q8IUD6 432 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms