RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SPINT1O43278 529 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SLC28A2O43868 658 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 OR1E1P30953 314 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 RPIAP49247 311 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CCNHP51946 323 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 KCNC4Q03721 635 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SLC20A2Q08357 652 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 EIF2B5Q13144 721 aaKnown RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CLN3Q13286 438 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SGCGQ13326 291 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 DRAP1Q14919 205 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CARD16Q5EG05 197 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TPRG1LQ5T0D9 272 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ACBD5Q5T8D3 534 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 FOXR1Q6PIV2 292 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ZDHHC17Q8IUH5 632 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 DENND6BQ8NEG7 585 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 WDR48Q8TAF3 677 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SHC3Q92529 594 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 NAT6Q93015 286 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PGAP3Q96FM1 320 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ZDHHC6Q9H6R6 413 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SPASTQ9UBP0 616 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 APOBEC3BQ9UH17 382 aaKnown RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CCDC187A0A096LP49 1063 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 IGLON5A6NGN9 336 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TSPAN6O43657 245 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ZMPSTE24O75844 475 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TNFSF15O95150 251 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 WISP1O95388 367 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 BMP6P22004 513 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 DNA2P51530 1060 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PDX1P52945 283 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 STX17P56962 302 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PFN3P60673 137 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ARF5P84085 180 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PTK2Q05397 1052 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PAK1Q13153 545 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 PTK2BQ14289 1009 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ZSCAN23Q3MJ62 389 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ELOA2Q8IYF1 753 aaPredicted RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 RBFAQ8N0V3 343 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ASB12Q8WXK4 309 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 NT5C3BQ969T7 300 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 RAB7BQ96AH8 199 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 C1orf74Q96LT6 269 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TBATAQ96M53 351 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 TBCBQ99426 244 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SPON2Q9BUD6 331 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ATP13A1Q9HD20 1204 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
CSMD2-202ENST00000338325 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 LRP4O75096 1905 aa11.7□□□□□ -0.54
CSMD2-202ENST00000338325 ARHGAP6O43182 974 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
CSMD2-202ENST00000338325 F9P00740 461 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 ITGA2BP08514 1039 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 SLC9A1P19634 815 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 KRT9P35527 623 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 ABL2P42684 1182 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 THOP1P52888 689 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 RNASE9P60153 205 aaKnown RBP11.69□□□□□ -0.54
CSMD2-202ENST00000338325 APBA1Q02410 837 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 MORC3Q14149 939 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 SPIDRQ14159 915 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 ARL13BQ3SXY8 428 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 PRRT3Q5FWE3 981 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 PHACTR4Q8IZ21 702 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 CCNL2Q96S94 520 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-202ENST00000338325 CCDC3Q9BQI4 270 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 LRRC61Q9BV99 259 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 TCEAL2Q9H3H9 227 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-202ENST00000338325 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 TMPRSS4Q9NRS4 437 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 TMEM51Q9NW97 253 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 ZNF212Q9UDV6 495 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 GGT7Q9UJ14 662 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
CSMD2-202ENST00000338325 PIEZO2Q9H5I5 2752 aa11.69□□□□□ -0.54
CSMD2-202ENST00000338325 LRRK1Q38SD2 2015 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 LMO7DNF2Z398 122 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 NEMP1O14524 444 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 SRGAP2O75044 1071 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 GCATO75600 419 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 ANXA6P08133 673 aa11.68□□□□□ -0.54
CSMD2-202ENST00000338325 KRT10P13645 584 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms