RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 STARD7Q9NQZ5 370 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 ARHGEF38Q9NXL2 777 aa8.97□□□□□ -0.97
SNCA-201ENST00000336904 MARCH4Q9P2E8 410 aaPredicted RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 APOBEC2Q9Y235 224 aaKnown RBP8.97□□□□□ -0.97
SNCA-201ENST00000336904 NLRC5Q86WI3 1866 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 SPECC1L-ADORA2AF8WAN1 911 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 KLF11O14901 512 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 ATP5HO75947 161 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 IGLV3-25P01717 112 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 CYP11A1P05108 521 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 SP3Q02447 781 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 ARL13AQ5H913 290 aaPredicted RBP8.96□□□□□ -0.97
SNCA-201ENST00000336904 TIFABQ6ZNK6 161 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 RIPOR1Q6ZS17 1223 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 NUP93Q8N1F7 819 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 PGBD5Q8N414 524 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 DPF3Q92784 378 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 PANX3Q96QZ0 392 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 OLFM1Q99784 485 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 SPON2Q9BUD6 331 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 UPF3AQ9H1J1 476 aaKnown RBP8.96□□□□□ -0.97
SNCA-201ENST00000336904 EBF2Q9HAK2 575 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 TNFRSF12AQ9NP84 129 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 GKN1Q9NS71 199 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 SMPD4Q9NXE4 827 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 UXTQ9UBK9 157 aaPredicted RBP8.96□□□□□ -0.97
SNCA-201ENST00000336904 SLC7A8Q9UHI5 535 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 ZDHHC2Q9UIJ5 367 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 ARL5AQ9Y689 179 aa8.96□□□□□ -0.97
SNCA-201ENST00000336904 VWA8A3KMH1 1905 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 A0A1W2PQ45 241 aaPredicted RBP8.96□□□□□ -0.98
SNCA-201ENST00000336904 A0A1W2PQY0 241 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 KCNU1A8MYU2 1149 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 AIM2O14862 343 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 NBNO60934 754 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 ELF1P32519 619 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 C1orf146Q5VVC0 180 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 PKN3Q6P5Z2 889 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 FRMD7Q6ZUT3 714 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 SLC24A5Q71RS6 500 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 C16orf59Q7L2K0 433 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 RNF180Q86T96 592 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 ULK2Q8IYT8 1036 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 OR7D4Q8NG98 312 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 ZNF398Q8TD17 642 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 MARCH2Q9P0N8 246 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 LNPEPQ9UIQ6 1025 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 TRHDEQ9UKU6 1024 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 CDY1Q9Y6F8 540 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 SF3B1O75533 1304 aaKnown RBP eCLIP8.96□□□□□ -0.983e-6■■■■■ 137.9
SNCA-201ENST00000336904 USP34Q70CQ2 3546 aa8.96□□□□□ -0.98
SNCA-201ENST00000336904 DNAH14Q0VDD8 3507 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 ATP6AP2A0A1C7CYW4 349 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 LRRC14BA6NHZ5 514 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 C9JVG2 144 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 MATN3O15232 486 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 NCAM2O15394 837 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 CFLARO15519 480 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 KPNA6O60684 536 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 ATP6AP2O75787 350 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 TCN1P20061 433 aaPredicted RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 SLC11A1P49279 550 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 RAB27AP51159 221 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 SGSHP51688 502 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 RPS24P62847 133 aaKnown RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 HPS6Q86YV9 775 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 TRIM42Q8IWZ5 723 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 RTL3Q8N8U3 475 aaKnown RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 PPHLN1Q8NEY8 458 aaKnown RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 PDCD6IPQ8WUM4 868 aaKnown RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 USP13Q92995 863 aaPredicted RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 NACA2Q9H009 215 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 CATSPERBQ9H7T0 1116 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 GTSE1Q9NYZ3 720 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 TAGLN3Q9UI15 199 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 PPM1HQ9ULR3 514 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 EME2A4GXA9 379 aaPredicted RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 STX16-NPEPL1H3BU86 382 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 BIRC5O15392 142 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 GJB5O95377 273 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 VNN2O95498 520 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 SPATA31D3P0C874 917 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 GNAZP19086 355 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 DNAJB2P25686 324 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 OR1E1P30953 314 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 CA8P35219 290 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 ABL2P42684 1182 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 HCAR3P49019 387 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 MLLT6P55198 1093 aaPredicted RBP8.95□□□□□ -0.98
SNCA-201ENST00000336904 NME5P56597 212 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 MUM1Q2TAK8 710 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 LINGO4Q6UY18 593 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 SPATA31D4Q6ZUB0 917 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 DEFB107AQ8IZN7 70 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 FAM156AQ8NDB6 213 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 OR13C4Q8NGS5 318 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 HEXDCQ8WVB3 486 aa8.95□□□□□ -0.98
SNCA-201ENST00000336904 ANKRD49Q8WVL7 239 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms