RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PLOD2O00469 737 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 AHSGP02765 367 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 HSPA1AP0DMV8 641 aaKnown RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 HSPA1BP0DMV9 641 aaKnown RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 GABRB3P28472 473 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 EPHX2P34913 555 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 CSRP3P50461 194 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 SH3D19Q5HYK7 790 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 SLCO4A1Q96BD0 722 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 GBA3Q9H227 469 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 ELP3Q9H9T3 547 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 TXNRD2Q9NNW7 524 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 HEATR9A2RTY3 570 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 CKMT2P17540 419 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 RPL10P27635 214 aaKnown RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 STT3AP46977 705 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 NPY2RP49146 381 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 RPL34P49207 117 aaKnown RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 SULT2A1Q06520 285 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 TSTD2Q5T7W7 516 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 LAYNQ6UX15 382 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 IFNLR1Q8IU57 520 aaPredicted RBP23.9■■□□□ 1.42
TSKU-201ENST00000333090 CACNA2D2Q9NY47 1150 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 GINS2Q9Y248 185 aa23.9■■□□□ 1.42
TSKU-201ENST00000333090 GRM5P41594 1212 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 PRAMEP78395 509 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 ACBD5Q5T8D3 534 aaPredicted RBP23.89■■□□□ 1.42
TSKU-201ENST00000333090 NPWQ8N729 165 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 MAELQ96JY0 434 aaKnown RBP23.89■■□□□ 1.42
TSKU-201ENST00000333090 MPHOSPH6Q99547 160 aaKnown RBP23.89■■□□□ 1.42
TSKU-201ENST00000333090 ANLNQ9NQW6 1124 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 RRN3Q9NYV6 651 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 NCKIPSDQ9NZQ3 722 aa23.89■■□□□ 1.42
TSKU-201ENST00000333090 TKTP29401 623 aaKnown RBP23.89■■□□□ 1.41
TSKU-201ENST00000333090 STX5Q13190 355 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 CTBP1Q13363 440 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 AGKQ53H12 422 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 MAMDC4Q6UXC1 1216 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 PDZD4Q76G19 769 aaPredicted RBP23.89■■□□□ 1.41
TSKU-201ENST00000333090 CEP97Q8IW35 865 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 DENND6AQ8IWF6 608 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 RBM12BQ8IXT5 1001 aaKnown RBP23.89■■□□□ 1.41
TSKU-201ENST00000333090 GFM2Q969S9 779 aaKnown RBP23.89■■□□□ 1.41
TSKU-201ENST00000333090 DNAI2Q9GZS0 605 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 SQORQ9Y6N5 450 aa23.89■■□□□ 1.41
TSKU-201ENST00000333090 SCN4AP35499 1836 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 NEMP2A6NFY4 417 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 ERI2A8K979 691 aaKnown RBP23.88■■□□□ 1.41
TSKU-201ENST00000333090 DAB1O75553 588 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 PGK1P00558 417 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 NDUFV1P49821 464 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 MPP1Q00013 466 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 ZNF484Q5JVG2 852 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 REP15Q6BDI9 236 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 ZBTB49Q6ZSB9 765 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 FAM47BQ8NA70 645 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 HMGCLL1Q8TB92 370 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 STON2Q8WXE9 905 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 NPY6RQ99463 290 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 MRPL40Q9NQ50 206 aaKnown RBP23.88■■□□□ 1.41
TSKU-201ENST00000333090 NUP205Q92621 2012 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 HTRA2O43464 458 aaPredicted RBP23.88■■□□□ 1.41
TSKU-201ENST00000333090 NOS2P35228 1153 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 TPI1P60174 286 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 CNSTQ6PJW8 725 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 PELI3Q8N2H9 469 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 TXNDC5Q8NBS9 432 aaKnown RBP23.88■■□□□ 1.41
TSKU-201ENST00000333090 RIN3Q8TB24 985 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 SNX25Q9H3E2 840 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 POMKQ9H5K3 350 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 SPAG4Q9NPE6 437 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 STAP1Q9ULZ2 295 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 ZNF510Q9Y2H8 683 aa23.88■■□□□ 1.41
TSKU-201ENST00000333090 FBP2O00757 339 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 TIPRLO75663 272 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 LRP8Q14114 963 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 FASTKQ14296 549 aaKnown RBP23.87■■□□□ 1.41
TSKU-201ENST00000333090 HMBOX1Q6NT76 420 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 CRYBG2Q8N1P7 616 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 FIBCD1Q8N539 461 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 RNF169Q8NCN4 708 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 BEST2Q8NFU1 509 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 FNDC8Q8TC99 324 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 CNOT6Q9ULM6 557 aaKnown RBP23.87■■□□□ 1.41
TSKU-201ENST00000333090 TRIM24O15164 1050 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 DDNO94850 711 aaPredicted RBP23.87■■□□□ 1.41
TSKU-201ENST00000333090 CYP2C9P11712 490 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 SLC7A1P30825 629 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 RAB10P61026 200 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 CDH17Q12864 832 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 LRRC52Q8N7C0 313 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 FTHL17Q9BXU8 183 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 CLK4Q9HAZ1 481 aaKnown RBP23.87■■□□□ 1.41
TSKU-201ENST00000333090 NSMCE4AQ9NXX6 385 aa23.87■■□□□ 1.41
TSKU-201ENST00000333090 PSMD12O00232 456 aaPredicted RBP23.86■■□□□ 1.41
TSKU-201ENST00000333090 STMN1P16949 149 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 PSMD8P48556 350 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 BPTFQ12830 3046 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 PPP1R3AQ16821 1122 aa23.86■■□□□ 1.41
TSKU-201ENST00000333090 CROCCQ5TZA2 2017 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms