RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TMEM114B3SHH9 223 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 NCAM2O15394 837 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 HIST1H2AGP0C0S8 130 aaPredicted RBP14.19□□□□□ -0.14
EPHB3-201ENST00000330394 USP17L7P0C7H9 530 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 LINC00032P0C843 101 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 ZNF286BP0CG31 522 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 HIST1H2ADP20671 130 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 RAB10P61026 200 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 NAB1Q13506 487 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 SEMA5AQ13591 1074 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 GRM3Q14832 879 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 IL23RQ5VWK5 629 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 PIGZQ86VD9 579 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 PDSS2Q86YH6 399 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 KIAA0319LQ8IZA0 1049 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 DCBLD1Q8N8Z6 715 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CHST13Q8NET6 341 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 HIST1H2AHQ96KK5 128 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 HIST1H2AJQ99878 128 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 H2AFJQ9BTM1 129 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 GPR88Q9GZN0 384 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 SLIT3O75094 1523 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 H6PDO95479 791 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CPSF4O95639 269 aaKnown RBP14.19□□□□□ -0.14
EPHB3-201ENST00000330394 ZNF37AP17032 561 aaPredicted RBP14.19□□□□□ -0.14
EPHB3-201ENST00000330394 IVDP26440 423 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 TM4SF1P30408 202 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 BNIP3Q12983 259 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 VPS26BQ4G0F5 336 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 METTL21CQ5VZV1 264 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 PRMT9Q6P2P2 845 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 ITFG2Q969R8 447 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 SKA1Q96BD8 255 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CSPG4P5Q96PW8 444 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 COQ7Q99807 217 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 MORF4L1Q9UBU8 362 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 OR12D3Q9UGF7 316 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 SNX8Q9Y5X2 465 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 TMEM247A6NEH6 219 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 RAD51BO15315 384 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CCNT2O60583 730 aaKnown RBP14.19□□□□□ -0.14
EPHB3-201ENST00000330394 VPS26AO75436 327 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 MED26O95402 600 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 TRAF3Q13114 568 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CACHD1Q5VU97 1274 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 OGFOD2Q6N063 350 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 CGB2Q6NT52 195 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 RRM2BQ7LG56 351 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 PCDH19Q8TAB3 1148 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 LMO3Q8TAP4 145 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 OMA1Q96E52 524 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 PKP2Q99959 881 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 GPATCH1Q9BRR8 931 aaKnown RBP14.19□□□□□ -0.14
EPHB3-201ENST00000330394 SLC39A3Q9BRY0 314 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
EPHB3-201ENST00000330394 TRIM43BA6NCK2 446 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 NEMP2A6NFY4 417 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 PDZK1P1A8MUH7 402 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 LZTS3O60299 673 aaPredicted RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SNAP91O60641 907 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 UBA1P22314 1058 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 GNA12Q03113 381 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 CSTF3Q12996 717 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 CA9Q16790 459 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SIX5Q8N196 739 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 STX19Q8N4C7 294 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ACTRT2Q8TDY3 377 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 UBASH3BQ8TF42 649 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 VPS33AQ96AX1 596 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ACO2Q99798 780 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 DPY30Q9C005 99 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 EPB41L1Q9H4G0 881 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 DNAJC28Q9NX36 388 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 BTN3A1O00481 513 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SH3BGRLO75368 114 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 RGS4P49798 205 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ENTPD1P49961 510 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SLC18A1P54219 525 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SPANXN2Q5MJ10 180 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 MARC1Q5VT66 337 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 COPS5Q92905 334 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 TBL1YQ9BQ87 522 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SENP6Q9GZR1 1112 aaPredicted RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ELOVL4Q9GZR5 314 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 EPS8L2Q9H6S3 715 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 TRHDEQ9UKU6 1024 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 TPD52L2O43399 206 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 LTA4HP09960 611 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 CYP4B1P13584 511 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ADSLP30566 484 aaPredicted RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 IDH2P48735 452 aaKnown RBP14.18□□□□□ -0.14
EPHB3-201ENST00000330394 TTC23Q5W5X9 447 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 TMEM26Q6ZUK4 368 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 DENND1AQ8TEH3 1009 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 MOCOSQ96EN8 888 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 DEPDC7Q96QD5 511 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 VTA1Q9NP79 307 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 SETD4Q9NVD3 440 aa14.18□□□□□ -0.14
EPHB3-201ENST00000330394 ADAM28Q9UKQ2 775 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms