RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 SAMD4BQ5PRF9 694 aaKnown RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM214Q6NUQ4 689 aaKnown RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 GADL1Q6ZQY3 521 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CHST15Q7LFX5 561 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 NANOGNBQ7Z5D8 188 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CADM3Q8N126 398 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 SEPT8Q92599 483 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 LGMNQ99538 433 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 HGH1Q9BTY7 390 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 TARM1B6A8C7 271 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 OGTO15294 1046 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 S100A1P23297 94 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 PSMB4P28070 264 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 PGGT1BP53609 377 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ZBTB17Q13105 803 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 DPYSL2Q16555 572 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 PHKG1Q16816 387 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 NCBP2-AS2Q69YL0 99 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 BTLAQ7Z6A9 289 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ARL10Q8N8L6 244 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ANKRD52Q8NB46 1076 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 PDPRQ8NCN5 879 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 STYXQ8WUJ0 223 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CYGBQ8WWM9 190 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CCDC138Q96M89 665 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CEP41Q9BYV8 373 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 UPF3AQ9H1J1 476 aaKnown RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 GBA3Q9H227 469 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SACM1LQ9NTJ5 587 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SCHIP1Q9P0W5 487 aaPredicted RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 DAPK2Q9UIK4 370 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CROTQ9UKG9 612 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ZCWPW2A0A1B0GU75 182 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ACOX3O15254 700 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 MSCO60682 206 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 TNNC2P02585 160 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CYP2C9P11712 490 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 CCND2P30279 289 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 YAP1P46937 504 aaKnown RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 HLCSP50747 726 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SURF1Q15526 300 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 KCNJ8Q15842 424 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 PITRM1Q5JRX3 1037 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 TBCELQ5QJ74 424 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 FAM45BPQ6NSW5 357 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SPRED1Q7Z699 444 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 FAM45AQ8TCE6 357 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 MTG1Q9BT17 334 aaPredicted RBP12.93□□□□□ -0.34
CCDC60-201ENST00000327554 TPK1Q9H3S4 243 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 ZFYVE28Q9HCC9 887 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
CCDC60-201ENST00000327554 RNF103O00237 685 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 MRASO14807 208 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 DLX3O60479 287 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 SEC14L2O76054 403 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 KCNH1O95259 989 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 NR3C2P08235 984 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 PFKMP08237 780 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 KRT19P08727 400 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 SDC4P31431 198 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 GLRBP48167 497 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 SLC7A2P52569 658 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 MPP1Q00013 466 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 FASTKQ14296 549 aaKnown RBP12.92□□□□□ -0.34
CCDC60-201ENST00000327554 MAPRE2Q15555 327 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 CLPPQ16740 277 aaPredicted RBP12.92□□□□□ -0.34
CCDC60-201ENST00000327554 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 AGKQ53H12 422 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 LAYNQ6UX15 382 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 DPH6Q7L8W6 267 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC60-201ENST00000327554 CXorf38Q8TB03 319 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
CCDC60-201ENST00000327554 VPS39Q96JC1 886 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 CSPG4P5Q96PW8 444 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 CSF3RQ99062 836 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 HACD3Q9P035 362 aa12.92□□□□□ -0.34
CCDC60-201ENST00000327554 TRPC5OSA6NMA1 111 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 TIMM44O43615 452 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 KDM1AO60341 852 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 JRKO75564 520 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 SRP72O76094 671 aaKnown RBP12.91□□□□□ -0.34
CCDC60-201ENST00000327554 DDHD2O94830 711 aa12.91□□□□□ -0.34
CCDC60-201ENST00000327554 RASAL1O95294 804 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms