RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PAFAH1B3Q15102 231 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TLR1Q15399 786 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 LRRC23Q53EV4 343 aaPredicted RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 SDHAF4Q5VUM1 108 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CLEC6AQ6EIG7 209 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 FBXL19Q6PCT2 694 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TMEM135Q86UB9 458 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TRHDEQ9UKU6 1024 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 DERAQ9Y315 318 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 TMEM114B3SHH9 223 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 NCAM2O15394 837 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 GRIK1P39086 918 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 MS4A2Q01362 244 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 DYNC1I2Q13409 638 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CEACAM7Q14002 265 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 GPR142Q7Z601 462 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 RP9Q8TA86 221 aaKnown RBP13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 PAAF1Q9BRP4 392 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 ADAMTS10Q9H324 1103 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 CPA4Q9UI42 421 aa13.05□□□□□ -0.32
HMGCS1-201ENST00000325110 I6L893 689 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 THP07101 528 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PIRTP0C851 137 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 FASTKQ14296 549 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 STXBP5Q5T5C0 1151 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 CNSTQ6PJW8 725 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ZYG11AQ6WRX3 759 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 LINC00523Q86TU6 105 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 OR9I1Q8NGQ6 314 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 HEXDCQ8WVB3 486 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ABTB1Q969K4 478 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PKP2Q99959 881 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 MRPL46Q9H2W6 279 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 FBXO5Q9UKT4 447 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 DSEQ9UL01 958 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 COPG1Q9Y678 874 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 MAGEB16A2A368 324 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 UBDO15205 165 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 SLC1A2P43004 574 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 RBM20Q5T481 1227 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 MYLPFQ96A32 169 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 MAF1Q9H063 256 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 DRC3Q9H069 523 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ALG9Q9H6U8 611 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 SAC3D1A6NKF1 404 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ZNF195O14628 629 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 CRTAMO95727 393 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PSME3P61289 254 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 CDK18Q07002 472 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PCID2Q5JVF3 399 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 SETD3Q86TU7 594 aaPredicted RBP13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 METTL23Q86XA0 190 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 CNTD1Q8N815 330 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 NAT14Q8WUY8 206 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 GORASP1Q9BQQ3 440 aa13.04□□□□□ -0.32
HMGCS1-201ENST00000325110 ZNF646O15015 1829 aaPredicted RBP13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 COL1A2P08123 1366 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 ANXA9O76027 345 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 FBXO21O94952 628 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 SLC35E2BP0CK96 405 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PPP1R3AQ16821 1122 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 CYS1Q717R9 158 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 MAML3Q96JK9 1138 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 CCT7Q99832 543 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PIF1Q9H611 641 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PCDHGB4Q9UN71 923 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PCDHGB5Q9Y5G0 923 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 NR5A2O00482 541 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 GPR32O75388 356 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 F9P00740 461 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 CPB1P15086 417 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PSMC3P17980 439 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
HMGCS1-201ENST00000325110 PKN3Q6P5Z2 889 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms