RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CACHD1Q5VU97 1274 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TMEM110Q86TL2 294 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 GPC2Q8N158 579 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 WDTC1Q8N5D0 677 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SIGLEC10Q96LC7 697 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SLC17A6Q9P2U8 582 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CNTN6Q9UQ52 1028 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 CCDC154A6NI56 674 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SYNCRIPO60506 623 aaKnown RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 THPOP40225 353 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 SNX17Q15036 470 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 ACBD5Q5T8D3 534 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TLDC1Q6P9B6 456 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 ZYG11AQ6WRX3 759 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 STK32CQ86UX6 486 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 TOP6BLQ8N6T0 577 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 FNDC5Q8NAU1 212 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 EIF2AQ9BY44 585 aaKnown RBP14.9□□□□□ -0.02
TCOF1-201ENST00000323668 ABCC13Q9NSE7 274 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 ATXN10Q9UBB4 475 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 DMTF1Q9Y222 760 aa14.9□□□□□ -0.02
TCOF1-201ENST00000323668 NRP2O60462 931 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CLK1P49759 484 aaKnown RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 DLG2Q15700 870 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 TREML1Q86YW5 311 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 MICU2Q8IYU8 434 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PTGR2Q8N8N7 351 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 TRPM4Q8TD43 1214 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF483Q8TF39 744 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PPP1R13LQ8WUF5 828 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 LENG1Q96BZ8 264 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 NXNL1Q96CM4 212 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 WWOXQ9NZC7 414 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 RSL24D1Q9UHA3 163 aaKnown RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 BCL10O95999 233 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 MAP1SQ66K74 1059 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 SH3GL1Q99961 368 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 IGSF9Q9P2J2 1179 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CDH9Q9ULB4 789 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 ADAMTSL3P82987 1691 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PDHXO00330 501 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 HNRNPRO43390 633 aaKnown RBP14.89□□□□□ -0.03
TCOF1-201ENST00000323668 SLC11A2P49281 568 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CLDN10P78369 228 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 SLC9A4Q6AI14 798 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 GK5Q6ZS86 529 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 FAM126BQ8IXS8 530 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 FAM81AQ8TBF8 368 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PEBP4Q96S96 227 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 AGAP2Q99490 1192 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 TRMOQ9BU70 441 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 DPEP3Q9H4B8 488 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 COMMD8Q9NX08 183 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 ANAPC2Q9UJX6 822 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 TRAF6Q9Y4K3 522 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PLCH1Q4KWH8 1693 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 RFPL1O75677 317 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 INPP1P49441 399 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 SCNN1BP51168 640 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 RAD23AP54725 363 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 STXBP5Q5T5C0 1151 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CDHR3Q6ZTQ4 885 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 CLEC4CQ8WTT0 213 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 GMLQ99445 158 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 MIPEPQ99797 713 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 XYLT2Q9H1B5 865 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 GLOD4Q9HC38 313 aa14.89□□□□□ -0.03
TCOF1-201ENST00000323668 PSEN2P49810 448 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 FAM35AQ86V20 835 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 LRRC49Q8IUZ0 686 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 P3H2Q8IVL5 708 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CLYBLQ8N0X4 340 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 TCF12Q99081 682 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 SPATA16Q9BXB7 569 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 GBA3Q9H227 469 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 VWA7Q9Y334 891 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 PTCH2Q9Y6C5 1203 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF197O14709 1029 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 APOA1P02647 267 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 ZNF177Q13360 481 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CCDC81Q6ZN84 652 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 LRRC8DQ7L1W4 858 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CUZD1Q86UP6 607 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CAND1Q86VP6 1230 aaKnown RBP14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CROCCP3Q8IVE0 287 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 PPTC7Q8NI37 304 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 STAG3L4Q8TBR4 150 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 MINDY3Q9H8M7 445 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 LRP5O75197 1615 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 PTPN3P26045 913 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 OR1E1P30953 314 aa14.88□□□□□ -0.03
TCOF1-201ENST00000323668 CDH13P55290 713 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms