RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 NCBP2-AS2Q69YL0 99 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 RFX6Q8HWS3 928 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 ZCCHC9Q8N567 271 aaKnown RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 PAF1Q8N7H5 531 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 OR2T34Q8NGX1 318 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 ARRDC3Q96B67 414 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 RNF25Q96BH1 459 aaPredicted RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 CALR3Q96L12 384 aaKnown RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 ZNF830Q96NB3 372 aaPredicted RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 TMEM74BQ9NUR3 256 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 LHX3Q9UBR4 397 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 EVLQ9UI08 416 aaPredicted RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 EIF2B4Q9UI10 523 aaKnown RBP19■□□□□ 0.63
CIRBP-201ENST00000320936 PILRBQ9UKJ0 227 aa19■□□□□ 0.63
CIRBP-201ENST00000320936 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19■□□□□ 0.63
CIRBP-201ENST00000320936 ANKRD36A6QL64 1941 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3DA0A087WVF3 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3IA0A087WXS9 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3EA0A087X179 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3KA0A087X1G2 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3FA6NER0 549 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 METTL12A8MUP2 240 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 PATE3B3GLJ2 98 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3LB9A6J9 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 SLC7A4O43246 635 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3HP0C7X1 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 ITGB7P26010 798 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 HOXD12P35452 270 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 LMNB2Q03252 620 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 RFTN1Q14699 578 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 CYTH1Q15438 398 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 IFI16Q16666 785 aaKnown RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TRIM61Q5EBN2 209 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 PLA2G2CQ5R387 149 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TMCO4Q5TGY1 634 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 AGBL4Q5VU57 503 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 KIAA0895LQ68EN5 471 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3GQ6DHY5 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3CQ6IPX1 549 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 RABEPKQ7Z6M1 372 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 CCDC50Q8IVM0 306 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 PLPP6Q8IY26 295 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 TBC1D3Q8IZP1 549 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 FAF2Q96CS3 445 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 NUSAP1Q9BXS6 441 aaKnown RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 OSBPL1AQ9BXW6 950 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 SUSD2Q9UGT4 822 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-201ENST00000320936 DMXL1Q9Y485 3027 aa18.99■□□□□ 0.63
CIRBP-201ENST00000320936 PI4KAP42356 2102 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 BTNL10A8MVZ5 291 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 PJA2O43164 708 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 FOXD2O60548 495 aaPredicted RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 PLXNA2O75051 1894 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 DYNLT1P63172 113 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 PAFAH1B3Q15102 231 aaKnown RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 DUOXA1Q1HG43 343 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 CFAP58Q5T655 872 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 FBXL19Q6PCT2 694 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 ERN2Q76MJ5 926 aaKnown RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 BBS5Q8N3I7 341 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 PQLC3Q8N755 202 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 TSEN2Q8NCE0 465 aaKnown RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 CEP76Q8TAP6 659 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 ANP32BQ92688 251 aaKnown RBP18.98■□□□□ 0.63
CIRBP-201ENST00000320936 BIRC7Q96CA5 298 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 ZNF599Q96NL3 588 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 RNF157Q96PX1 679 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 TRIM10Q9UDY6 481 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 HEY1Q9Y5J3 304 aa18.98■□□□□ 0.63
CIRBP-201ENST00000320936 ADAMTS9Q9P2N4 1935 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 RNF103O00237 685 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 APOL1O14791 398 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 ARHGAP6O43182 974 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
CIRBP-201ENST00000320936 NEBLO76041 1014 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 TGM1P22735 817 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 MARCKSL1P49006 195 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 NEK3P51956 506 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 GBE1Q04446 702 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 PIP5KL1Q5T9C9 394 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 GDPD4Q6W3E5 623 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 PARS2Q7L3T8 475 aaKnown RBP18.97■□□□□ 0.63
CIRBP-201ENST00000320936 KIAA1524Q8TCG1 905 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 LRIG1Q96JA1 1093 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 KLHL32Q96NJ5 620 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 HDAC8Q9BY41 377 aa18.97■□□□□ 0.63
CIRBP-201ENST00000320936 C3orf70A6NLC5 250 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-201ENST00000320936 ZNF487B1APH4 448 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 INSIG1O15503 277 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 MAFKO60675 156 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 PCDH8O95206 1070 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 PIGNO95427 931 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 MX2P20592 715 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 MAT2AP31153 395 aaKnown RBP18.96■□□□□ 0.63
CIRBP-201ENST00000320936 GARSP41250 739 aaKnown RBP18.96■□□□□ 0.63
CIRBP-201ENST00000320936 RENBPP51606 427 aa18.96■□□□□ 0.63
CIRBP-201ENST00000320936 SLC10A7Q0GE19 358 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms