RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TSPAN6O43657 245 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 SERPINC1P01008 464 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 GZMAP12544 262 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 TPM4P67936 248 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 SGCGQ13326 291 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
TPM1-203ENST00000317516 MAMLD1Q13495 774 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 PARP15Q460N3 678 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 HS1BP3Q53T59 392 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 EIF3CQ99613 913 aaKnown RBP18.05■□□□□ 0.48
TPM1-203ENST00000317516 MYOCQ99972 504 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 SYT11Q9BT88 431 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 CCDC86Q9H6F5 360 aaKnown RBP18.05■□□□□ 0.48
TPM1-203ENST00000317516 ZFR2Q9UPR6 939 aaKnown RBP18.05■□□□□ 0.48
TPM1-203ENST00000317516 CA5BQ9Y2D0 317 aa18.05■□□□□ 0.48
TPM1-203ENST00000317516 SRRM3A6NNA2 597 aaPredicted RBP18.04■□□□□ 0.48
TPM1-203ENST00000317516 C16orf96A6NNT2 1141 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 RNF103O00237 685 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 RNF8O76064 485 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 PAK4O96013 591 aaPredicted RBP18.04■□□□□ 0.48
TPM1-203ENST00000317516 PSMA2P25787 234 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 KLHL30Q0D2K2 578 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
TPM1-203ENST00000317516 TMEM259Q4ZIN3 620 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 SEL1L3Q68CR1 1132 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 PLEKHA7Q6IQ23 1121 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 TMPRSS12Q86WS5 348 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 UMODL1-AS1Q8N2C9 162 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 GDAP1L1Q96MZ0 367 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 HAUS4Q9H6D7 363 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 TAS2R14Q9NYV8 317 aa18.04■□□□□ 0.48
TPM1-203ENST00000317516 IGF2RP11717 2491 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 A0A1B0GTH6 734 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 A6NNZ2 444 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 RASA4BC9J798 803 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 RASA4O43374 803 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 RFPL3O75679 317 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 TMCC1O94876 653 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 IGSF6O95976 241 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 FTLP02792 175 aaPredicted RBP18.03■□□□□ 0.48
TPM1-203ENST00000317516 TPI1P60174 286 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 ILKQ13418 452 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 DHRS13Q6UX07 377 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 GDPD4Q6W3E5 623 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 PARS2Q7L3T8 475 aaKnown RBP18.03■□□□□ 0.48
TPM1-203ENST00000317516 ABI3BPQ7Z7G0 1075 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 TTC7BQ86TV6 843 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 OR6K2Q8NGY2 324 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 TRIM11Q96F44 468 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 CALN1Q9BXU9 219 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 FZD3Q9NPG1 666 aa18.03■□□□□ 0.48
TPM1-203ENST00000317516 DAPK3O43293 454 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 UGT2B4P06133 528 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 CKMT2P17540 419 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 GKP32189 559 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 PRKCIP41743 596 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 CLDN2P57739 230 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 RHOAP61586 193 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 OGDHQ02218 1023 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 SERINC3Q13530 473 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 NR1I3Q14994 352 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 ERMARDQ5T6L9 678 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 Q6ZSR6 202 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 OR13H1Q8NG92 308 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 ASB12Q8WXK4 309 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 HMCESQ96FZ2 354 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 KLHL32Q96NJ5 620 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.48
TPM1-203ENST00000317516 LENG8Q96PV6 779 aaPredicted RBP18.02■□□□□ 0.48
TPM1-203ENST00000317516 NOL6Q9H6R4 1146 aaKnown RBP18.02■□□□□ 0.48
TPM1-203ENST00000317516 MRPL47Q9HD33 250 aaKnown RBP18.02■□□□□ 0.48
TPM1-203ENST00000317516 AP4E1Q9UPM8 1137 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 SCINQ9Y6U3 715 aa18.02■□□□□ 0.48
TPM1-203ENST00000317516 FRYQ5TBA9 3013 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 NEMP2A6NFY4 417 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 TMEM191CA6NGB0 347 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 FPGTO14772 594 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 PRPSAP2O60256 369 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 MYBL1P10243 752 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 JUPP14923 745 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 DGKAP23743 735 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 HNF1BP35680 557 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 RABIFP47224 123 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 NDST2P52849 883 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 DNAJC3Q13217 504 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 GRM3Q14832 879 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 IQCB1Q15051 598 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 ATXN7L2Q5T6C5 722 aaPredicted RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 GCNT7Q6ZNI0 430 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 KANSL1Q7Z3B3 1105 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 ZNF571Q7Z3V5 609 aaPredicted RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 PROSER1Q86XN7 944 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms