RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SNX29P2Q8IUI4 249 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 KLHDC8BQ8IXV7 354 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 LRRC47Q8N1G4 583 aaKnown RBP6.74□□□□□ -1.33
ZNF540-201ENST00000316433 BANPQ8N9N5 519 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 MCPH1Q8NEM0 835 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 SHCBP1Q8NEM2 672 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 FANK1Q8TC84 345 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 MARVELD3Q96A59 401 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 OPALINQ96PE5 141 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 OSBPL11Q9BXB4 747 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 CD93Q9NPY3 652 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 MAT2BQ9NZL9 334 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.74□□□□□ -1.33
ZNF540-201ENST00000316433 CPNE7Q9UBL6 633 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 ANAPC5Q9UJX4 755 aa6.74□□□□□ -1.33
ZNF540-201ENST00000316433 ASTN2O75129 1339 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 A0A0G2JMP0 313 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 C16orf96A6NNT2 1141 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GAS2O43903 313 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 KATNA1O75449 491 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 C4BPAP04003 597 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 EEF1DP29692 281 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 HTR2BP41595 481 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 QARSP47897 775 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ARHGDIAP52565 204 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ITGA8P53708 1063 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CD83Q01151 205 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PIGHQ14442 188 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PRR16Q569H4 304 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 FAM26DQ5JW98 314 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LIN9Q5TKA1 542 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ATG16L1Q676U5 607 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 UNC5DQ6UXZ4 953 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZFPM1Q8IX07 1006 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GALNT12Q8IXK2 581 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ABRAQ8N0Z2 381 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CPA6Q8N4T0 437 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CCDC33Q8N5R6 958 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 MYCT1Q8N699 235 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 MCUQ8NE86 351 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ABHD11Q8NFV4 315 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 LRRC20Q8TCA0 184 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLC2A14Q8TDB8 520 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZFYVE19Q96K21 471 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 C12orf42Q96LP6 360 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 EFHD1Q9BUP0 239 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 WWP1Q9H0M0 922 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 COPS7BQ9H9Q2 264 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 AKIP1Q9NQ31 210 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 RAB20Q9NX57 234 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TOR4AQ9NXH8 423 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PKD2L2Q9NZM6 624 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PKD2L1Q9P0L9 805 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF219Q9P2Y4 722 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 FBXO40Q9UH90 709 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CCNL1Q9UK58 526 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TBX20Q9UMR3 447 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ADAMTS5Q9UNA0 930 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DIMT1Q9UNQ2 313 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM5Q9Y2B1 443 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PTPRFP10586 1907 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 IGKV6D-21A0A0A0MT36 114 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 A0A0X1KG70 313 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM191CA6NGB0 347 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SPDYE2BA6NHP3 402 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TRPC5OSA6NMA1 111 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 F8W810 466 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TOR1AO14656 332 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CD4P01730 458 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM191BP0C7N4 346 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SPDYE6P0CI01 402 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 AOC1P19801 751 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 MMP8P22894 467 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ACAT1P24752 427 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 TALDO1P37837 337 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 NPTX2P47972 431 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 KCNJ1P48048 391 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 HARS2P49590 506 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ALDH18A1P54886 795 aaKnown RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PSMC5P62195 406 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 CLCQ05315 142 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GRSF1Q12849 480 aaKnown RBP eCLIP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GALNT3Q14435 633 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SPDYE2Q495Y8 402 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 DCAF17Q5H9S7 520 aaPredicted RBP6.73□□□□□ -1.33
ZNF540-201ENST00000316433 FAM209BQ5JX69 171 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 SLFN12LQ6IEE8 588 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ZFP1Q6P2D0 407 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 PADI6Q6TGC4 694 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 ATG14Q6ZNE5 492 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 BBS12Q6ZW61 710 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
ZNF540-201ENST00000316433 FBXW8Q8N3Y1 598 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms