RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SEPT6Q14141 434 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 ZCCHC23Q6ZST2 131 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 ZC3HC1Q86WB0 502 aaKnown RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 C20orf27Q9GZN8 174 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 A0A096LPK6 155 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 H3BNC9 293 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 PRRG1O14668 218 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TIMP1P01033 207 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 AHSGP02765 367 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 PROCP04070 461 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 URODP06132 367 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 DLDP09622 509 aaKnown RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 CORO1AP31146 461 aaKnown RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 OCRLQ01968 901 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TWF1Q12792 350 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 CTBP1Q13363 440 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 GRM3Q14832 879 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 DENND6AQ8IWF6 608 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 OR7D4Q8NG98 312 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 RAB3IL1Q8TBN0 382 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 WBP2Q969T9 261 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TADA1Q96BN2 335 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 PLD4Q96BZ4 506 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 TRMT2BQ96GJ1 504 aaKnown RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 PRICKLE1Q96MT3 831 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 C7orf26Q96N11 449 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 PDFQ9HBH1 243 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 NSMCE4AQ9NXX6 385 aa18.59■□□□□ 0.57
CCDC43-201ENST00000315286 UXTQ9UBK9 157 aaPredicted RBP18.59■□□□□ 0.57
CCDC43-201ENST00000315286 MUSKO15146 869 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 ACRP10323 421 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 LAG3P18627 525 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 KCNA4P22459 653 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 SERPINH1P50454 418 aaKnown RBP18.58■□□□□ 0.57
CCDC43-201ENST00000315286 GNA12Q03113 381 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 MSLNQ13421 630 aaPredicted RBP18.58■□□□□ 0.57
CCDC43-201ENST00000315286 TMCO4Q5TGY1 634 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 DNAJB7Q7Z6W7 309 aaPredicted RBP18.58■□□□□ 0.57
CCDC43-201ENST00000315286 DDX53Q86TM3 631 aaKnown RBP18.58■□□□□ 0.57
CCDC43-201ENST00000315286 CNTN4Q8IWV2 1026 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.57
CCDC43-201ENST00000315286 SEMA3CQ99985 751 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 RHOJQ9H4E5 214 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 SLC40A1Q9NP59 571 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 WBP1LQ9NX94 342 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 ACTL7AQ9Y615 435 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 NUMBLQ9Y6R0 609 aa18.58■□□□□ 0.57
CCDC43-201ENST00000315286 SNNO75324 88 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-201ENST00000315286 MPOP05164 745 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 C2P06681 752 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 IRF1P10914 325 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 HOXD9P28356 352 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-201ENST00000315286 SGSHP51688 502 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 ARFIP2P53365 341 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 CDH4P55283 916 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 IRF9Q00978 393 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 STX3Q13277 289 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 VEPH1Q14D04 833 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 PCLAFQ15004 111 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 RABGAP1LQ5R372 815 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 MBLAC2Q68D91 279 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 PACS2Q86VP3 889 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 GPR22Q99680 433 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 KLF16Q9BXK1 252 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-201ENST00000315286 MAGEH1Q9H213 219 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 C11orf49Q9H6J7 331 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 SLC39A10Q9ULF5 831 aa18.58■□□□□ 0.56
CCDC43-201ENST00000315286 FGF3P11487 239 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-201ENST00000315286 ELF1P32519 619 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 GJA8P48165 433 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 MPP1Q00013 466 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 DBN1Q16643 649 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 KIAA0930Q6ICG6 404 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-201ENST00000315286 TMEM150AQ86TG1 271 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 MTDHQ86UE4 582 aaKnown RBP18.57■□□□□ 0.56
CCDC43-201ENST00000315286 TMEM120AQ9BXJ8 343 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 PRKD2Q9BZL6 878 aa18.57■□□□□ 0.56
CCDC43-201ENST00000315286 POLR1EQ9GZS1 481 aaKnown RBP18.57■□□□□ 0.56
CCDC43-201ENST00000315286 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
CCDC43-201ENST00000315286 HEATR9A2RTY3 570 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 RASSF9O75901 435 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 PAMP19021 973 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 PGGT1BP53609 377 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 ZNF235Q14590 738 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 SIRPB2Q5JXA9 342 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 IL31Q6EBC2 164 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 CLEC14AQ86T13 490 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 C10orf107Q8IVU9 208 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 PPP1R14CQ8TAE6 165 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 SPON2Q9BUD6 331 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 COPG2Q9UBF2 871 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 LOC285095A0A1B0GVY8 99 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 C2orf71A6NGG8 1288 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 TSPAN3O60637 253 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 SIN3BO75182 1162 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 ATXN1LP0C7T5 689 aaKnown RBP18.56■□□□□ 0.56
CCDC43-201ENST00000315286 SAT1P21673 171 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 HADHAP40939 763 aa18.56■□□□□ 0.56
CCDC43-201ENST00000315286 CSRP3P50461 194 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms