RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 NAB1Q13506 487 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 LGSNQ5TDP6 509 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 TRIM68Q6AZZ1 485 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 CTAGE3PQ8IX95 158 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 CELF5Q8N6W0 485 aaKnown RBP25.29■■□□□ 1.64
CDPF1-201ENST00000314567 PPM1NQ8N819 430 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 DYDC1Q8WWB3 177 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 SMARCD2Q92925 531 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 TMA16Q96EY4 203 aaKnown RBP25.29■■□□□ 1.64
CDPF1-201ENST00000314567 ZFYVE19Q96K21 471 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 CCT8L2Q96SF2 557 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 DENND4AQ7Z401 1863 aa25.29■■□□□ 1.64
CDPF1-201ENST00000314567 NEBLO76041 1014 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 POLBP06746 335 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 FCARP24071 287 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 GEMP55040 296 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 SPANXN3Q5MJ09 141 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 TTC39BQ5VTQ0 682 aaPredicted RBP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 TANGO2Q6ICL3 276 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 ANKRD42Q8N9B4 389 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 DNAAF3Q8N9W5 541 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 WFDC5Q8TCV5 224 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 ASIC4Q96FT7 647 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 HMCESQ96FZ2 354 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 CHMP6Q96FZ7 201 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 DDX50Q9BQ39 737 aaKnown RBP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 RBM22Q9NW64 420 aaKnown RBP eCLIP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 GDE1Q9NZC3 331 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 ZMYM5Q9UJ78 669 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 CLEC4EQ9ULY5 219 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 USP15Q9Y4E8 981 aaPredicted RBP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 A0A0D9SEW6 157 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 RAMP2O60895 175 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 KRT37O76014 449 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 KCNA5P22460 613 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 RENBPP51606 427 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 CDH17Q12864 832 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 CRYMQ14894 314 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 SKIV2LQ15477 1246 aaKnown RBP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 FSCBQ5H9T9 825 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 TMEM25Q86YD3 366 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 DEFB123Q8N688 67 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 DDI1Q8WTU0 396 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 CDKL2Q92772 493 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 OXNAD1Q96HP4 312 aaPredicted RBP25.28■■□□□ 1.64
CDPF1-201ENST00000314567 RIPOR3Q96MK2 946 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 ZNF510Q9Y2H8 683 aa25.28■■□□□ 1.64
CDPF1-201ENST00000314567 MAGEB16A2A368 324 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 FAM155BO75949 473 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 ACVRL1P37023 503 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 SERPINB9P50453 376 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 TNK2Q07912 1038 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 MPP2Q14168 576 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 FRG1Q14331 258 aaKnown RBP25.27■■□□□ 1.64
CDPF1-201ENST00000314567 CARNMT1Q8N4J0 409 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 ZNF473Q8WTR7 871 aaKnown RBP25.27■■□□□ 1.64
CDPF1-201ENST00000314567 NSMCE1Q8WV22 266 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 SP110Q9HB58 689 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 CD207Q9UJ71 328 aa25.27■■□□□ 1.64
CDPF1-201ENST00000314567 A0A1W2PPM1 405 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 HEPACAM2A8MVW5 462 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 PIAS1O75925 651 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 HLA-DQB2P05538 268 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 CDH4P55283 916 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 TRMT10BQ6PF06 316 aaKnown RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 MARK2Q7KZI7 788 aaKnown RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 OTOP3Q7RTS5 596 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 C4orf33Q8N1A6 199 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 MGARPQ8TDB4 240 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 MTBPQ96DY7 904 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 IL22Q9GZX6 179 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 KIF9Q9HAQ2 790 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 SMYD2Q9NRG4 433 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 CXorf49A8MYA2 514 aaPredicted RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 TYROBPO43914 113 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 PEX11BO96011 259 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 MT-ND3P03897 115 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 KRT4P19013 534 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 CNTFP26441 200 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 CRADDP78560 199 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 IL10RBQ08334 325 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 POLD3Q15054 466 aaPredicted RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 CPXM2Q8N436 756 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 HJURPQ8NCD3 748 aaPredicted RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 ZNF317Q96PQ6 595 aaPredicted RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 PLA2G2FQ9BZM2 168 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 RABEP2Q9H5N1 569 aa25.26■■□□□ 1.63
CDPF1-201ENST00000314567 PIH1D1Q9NWS0 290 aaKnown RBP25.26■■□□□ 1.63
CDPF1-201ENST00000314567 A0A1B0GVM2 712 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 GRXCR2A6NFK2 248 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 TCAF2A6NFQ2 919 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 USP12O75317 370 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 KRT38O76015 456 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 SNRPAP09012 282 aaKnown RBP25.25■■□□□ 1.63
CDPF1-201ENST00000314567 FOSL2P15408 326 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 TCF3P15923 654 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 HOXD9P28356 352 aaPredicted RBP25.25■■□□□ 1.63
CDPF1-201ENST00000314567 CXorf57Q6NSI4 855 aaKnown RBP25.25■■□□□ 1.63
CDPF1-201ENST00000314567 OR7D4Q8NG98 312 aa25.25■■□□□ 1.63
CDPF1-201ENST00000314567 CKAP2Q8WWK9 683 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms