RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 FADS3Q9Y5Q0 445 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 LRRK1Q38SD2 2015 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 PRLRP16471 622 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 IL1R2P27930 398 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 HTR7P34969 479 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 RECQLP46063 649 aaPredicted RBP20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 RXRGP48443 463 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 NEK3P51956 506 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 C21orf59P57076 290 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 SETMARQ53H47 684 aaPredicted RBP20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 ATXN7L2Q5T6C5 722 aaPredicted RBP20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 ARHGAP12Q8IWW6 846 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 CHCHD4Q8N4Q1 142 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 PNPLA1Q8N8W4 532 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 RHBDD1Q8TEB9 315 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 CAAP1Q9H8G2 361 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 ERVMER34-1Q9H9K5 563 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 GPR27Q9NS67 375 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 IFNKQ9P0W0 207 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 LHX3Q9UBR4 397 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 NEUROG3Q9Y4Z2 214 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 TDRD6O60522 2096 aaKnown RBP20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 DMXL2Q8TDJ6 3036 aa20.15■□□□□ 0.82
PDZRN3-202ENST00000308537 A0A087X0T9 212 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ZSCAN5CA6NGD5 496 aaPredicted RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 PRAMEF26H0Y7S4 382 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 FGF10O15520 208 aaPredicted RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 AP1G1O43747 822 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 DFNA5O60443 496 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ATXN1LP0C7T5 689 aaKnown RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 FAM228BP0C875 321 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 EPHA8P29322 1005 aaPredicted RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 DNA2P51530 1060 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 GEMIN4P57678 1058 aaKnown RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ZBED6P86452 979 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 CYTH1Q15438 398 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 PARP15Q460N3 678 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 INO80DQ53TQ3 878 aaPredicted RBP20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ERMARDQ5T6L9 678 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 GATAD2AQ86YP4 633 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 KLK6Q92876 244 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 LRIG1Q96JA1 1093 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ZDHHC6Q9H6R6 413 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 CATSPERBQ9H7T0 1116 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 FZD3Q9NPG1 666 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 GDF3Q9NR23 364 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 PCSK1NQ9UHG2 260 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 GGT7Q9UJ14 662 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 CELSR3Q9NYQ7 3312 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 PKD1L2Q7Z442 2459 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 ANKRD36A6QL64 1941 aa20.14■□□□□ 0.81
PDZRN3-202ENST00000308537 CFAP47Q6ZTR5 3102 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 C16orf96A6NNT2 1141 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 EIF3CLB5ME19 914 aaKnown RBP20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC31A1O15431 190 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 BUB1O43683 1085 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 TRIM16O95361 564 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 MYBL1P10243 752 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 GRK6P43250 576 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 TPI1P60174 286 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 OVGP1Q12889 678 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 MYLK3Q32MK0 819 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 GCNT7Q6ZNI0 430 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 NPWQ8N729 165 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 PPP1R16AQ96I34 528 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 EIF3CQ99613 913 aaKnown RBP20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC39A8Q9C0K1 460 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 DHX35Q9H5Z1 703 aaKnown RBP20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 MSRB2Q9Y3D2 182 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 MFHAS1Q9Y4C4 1052 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 PCDHB9Q9Y5E1 797 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 APC2O95996 2303 aa20.13■□□□□ 0.81
PDZRN3-202ENST00000308537 LAMA5O15230 3695 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 J3KR12 359 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 AREL1O15033 823 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 RAD51BO15315 384 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 INSIG1O15503 277 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 CAPNS1P04632 268 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 SERPING1P05155 500 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 HNRNPH3P31942 346 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 SNRPD1P62314 119 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 BNIP3Q12983 259 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 DPYSQ14117 519 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 SUZ12Q15022 739 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 TDRD12Q587J7 1177 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 ZNF805Q5CZA5 627 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 TXNRD3NBQ6F5E7 133 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 UNQ6494/PRO21346Q6UXR6 183 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 RFX8Q6ZV50 586 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 ABI3BPQ7Z7G0 1075 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 PSTKQ8IV42 348 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 TP53INP2Q8IXH6 220 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 SLC22A18ASQ8N1D0 253 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 CASKIN2Q8WXE0 1202 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 ARHGEF26Q96DR7 871 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 CELF6Q96J87 481 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 KLF6Q99612 283 aaPredicted RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 MYOCQ99972 504 aa20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 XPO4Q9C0E2 1151 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-202ENST00000308537 THAP2Q9H0W7 228 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms