RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TMEM233B4DJY2 109 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 PLIN3O60664 434 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 VAPBO95292 243 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 LTFP02788 710 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 KDELR1P24390 212 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 EEF1B2P24534 225 aaKnown RBP16.44■□□□□ 0.22
CCDC8-201ENST00000307522 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
CCDC8-201ENST00000307522 OLIG2Q13516 323 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 ZNF667Q5HYK9 610 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 GK5Q6ZS86 529 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 CARM1Q86X55 608 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 HERC6Q8IVU3 1022 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 RTKNQ9BST9 563 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 PDZD7Q9H5P4 517 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 PNPLA3Q9NST1 481 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 WDR27A2RRH5 827 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 SLC15A5A6NIM6 579 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 SERPINE1P05121 402 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 AFF1P51825 1210 aaKnown RBP16.44■□□□□ 0.22
CCDC8-201ENST00000307522 BFSP2Q13515 415 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 ADRM1Q16186 407 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 TIGD2Q4W5G0 525 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 DHRS4L2Q6PKH6 230 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 ZC3H15Q8WU90 426 aaKnown RBP16.44■□□□□ 0.22
CCDC8-201ENST00000307522 IL1RL2Q9HB29 575 aa16.44■□□□□ 0.22
CCDC8-201ENST00000307522 M0QYV0 167 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 MAN1A2O60476 641 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 ESRRBO95718 433 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 JAK1P23458 1154 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 ADAM17P78536 824 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 PTK2BQ14289 1009 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 LSM12Q3MHD2 195 aaKnown RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 TDRD5Q8NAT2 981 aaKnown RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 SGCDQ92629 289 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 CPXM1Q96SM3 734 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 B3GNT5Q9BYG0 378 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 FRMD8Q9BZ67 464 aaPredicted RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 STN1Q9H668 368 aaKnown RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 SMOXQ9NWM0 555 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 MYADML2A6NDP7 307 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 KCNU1A8MYU2 1149 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 ASPAP45381 313 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 GLRBP48167 497 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 IRF9Q00978 393 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 FPGSQ05932 587 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 TRIM32Q13049 653 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 KCNJ11Q14654 390 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 PLPPR4Q7Z2D5 763 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 PLEKHH3Q7Z736 793 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 CDH19Q9H159 772 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 TIMM22Q9Y584 194 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 TIMM13Q9Y5L4 95 aaPredicted RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 GOLGA8TH3BQL2 631 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 GMNNO75496 209 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 MMP8P22894 467 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 ZBED5Q49AG3 693 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 PTPN20Q4JDL3 420 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 CBR4Q8N4T8 237 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC8-201ENST00000307522 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 TMEM134Q9H6X4 195 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 GIN1Q9NXP7 522 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 KLQ9UEF7 1012 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 BCAP29Q9UHQ4 241 aa16.43■□□□□ 0.22
CCDC8-201ENST00000307522 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 MMP3P08254 477 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 ZNF12P17014 697 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 MATN1P21941 496 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 TYK2P29597 1187 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 IDUAP35475 653 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 CDH6P55285 790 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 DEPDC1Q5TB30 811 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 HMBOX1Q6NT76 420 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 KCTD8Q6ZWB6 473 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 CATSPER1Q8NEC5 780 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 NPLQ9BXD5 320 aaPredicted RBP16.42■□□□□ 0.22
CCDC8-201ENST00000307522 ELOVL4Q9GZR5 314 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 FZD8Q9H461 694 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC8-201ENST00000307522 C9JVG2 144 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 SULT1C4O75897 302 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 ERVK-10P10266 1014 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 GABRB2P47870 512 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 GSSP48637 474 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 CLCQ05315 142 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 BCL2A1Q16548 175 aa16.42■□□□□ 0.22
CCDC8-201ENST00000307522 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms