RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 RABGEF1Q9UJ41 708 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 LRCH1Q9Y2L9 728 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 TPRKBQ9Y3C4 175 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 SLC35F4A4IF30 521 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 GNB5O14775 395 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CLPXO76031 633 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 MCL1Q07820 350 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ZNF460Q14592 562 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 DLG2Q15700 870 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 RFWD3Q6PCD5 774 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 DPF3Q92784 378 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 OR10H3O60404 316 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 PDE9AO76083 593 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 SLC5A9Q2M3M2 681 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 GFOD2Q3B7J2 385 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 CREG2Q8IUH2 290 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 AENQ8WTP8 325 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 PRDM15P57071 1507 aaPredicted RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 RAMP2O60895 175 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 ZCCHC8Q6NZY4 707 aaKnown RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 PTGR2Q8N8N7 351 aaPredicted RBP12.76□□□□□ -0.37
USP38-201ENST00000307017 CCDC115Q96NT0 180 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 OPTCQ9UBM4 332 aa12.76□□□□□ -0.37
USP38-201ENST00000307017 AP2A2O94973 939 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 CCNHP51946 323 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 KRR1Q13601 381 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 SETMARQ53H47 684 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 RPTNQ6XPR3 784 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 FAM110BQ8TC76 370 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SYN2Q92777 582 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 PNMA5Q96PV4 448 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ARL8BQ9NVJ2 186 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 FOXP2O15409 715 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 KRT33AO76009 404 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 QPRTQ15274 297 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 INSCQ1MX18 579 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 PAGE2BQ5JRK9 111 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 KCNV1Q6PIU1 500 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 LENG1Q96BZ8 264 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SLITRK2Q9H156 845 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 TMEM114B3SHH9 223 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SMARCB1Q12824 385 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SGCGQ13326 291 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 LRRC73Q5JTD7 316 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 CRTC3Q6UUV7 619 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SATL1Q86VE3 508 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 FBXW8Q8N3Y1 598 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ZNF433Q8N7K0 673 aaPredicted RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 MOSPD2Q8NHP6 518 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 GORASP1Q9BQQ3 440 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 C9orf16Q9BUW7 83 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 RGS14O43566 566 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ERAL1O75616 437 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 ICAM1P05362 532 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 BCAP31P51572 246 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 FAM151BQ6UXP7 276 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 CLEC17AQ6ZS10 378 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 FAM129CQ86XR2 697 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 FAM98AQ8NCA5 519 aaKnown RBP12.75□□□□□ -0.37
USP38-201ENST00000307017 UGT2B28Q9BY64 529 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 NT5C1B-RDH14C9J2C7 533 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 G3V2T6 193 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ZFPM1Q8IX07 1006 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 ABRAQ8N0Z2 381 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 LGMNQ99538 433 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 CIB1Q99828 191 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 GSDMCQ9BYG8 508 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 EPS8L2Q9H6S3 715 aa12.75□□□□□ -0.37
USP38-201ENST00000307017 MAGEB2O15479 319 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 GOT1P17174 413 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 HOXA7P31268 230 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms