RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 WSB2Q9NYS7 404 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LHX3Q9UBR4 397 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MBD1Q9UIS9 605 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PPP2R2CQ9Y2T4 447 aa11.17□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TRPM6Q9BX84 2022 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 hCG_1818297A0A087WSY0 165 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FAM47DPA6NHR8 397 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LRRC72A6NJI9 287 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SLC7A4O43246 635 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MAFKO60675 156 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CST8O60676 142 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZNF821O75541 412 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 EPN2O95208 641 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CTSLP07711 333 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RETP07949 1114 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 C7P10643 843 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KRT10P13645 584 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PI4KAP42356 2102 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CDKN2BP42772 138 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MMP13P45452 471 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MAPK8P45983 427 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CREB5Q02930 508 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GBE1Q04446 702 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CYTH1Q15438 398 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MYLK3Q32MK0 819 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SYCP2LQ5T4T6 812 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SEL1L2Q5TEA6 688 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MARC1Q5VT66 337 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCDC13Q8IYE1 715 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RGL4Q8IZJ4 473 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 AADATQ8N5Z0 425 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PLD5Q8N7P1 536 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FRMD1Q8N878 549 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OR14C36Q8NHC7 312 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 UBE2Q2Q8WVN8 375 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SNX19Q92543 992 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HSPA12BQ96MM6 686 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PCED1AQ9H1Q7 454 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NEUROG2Q9H2A3 272 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DTLQ9NZJ0 730 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 EVLQ9UI08 416 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SARDHQ9UL12 918 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PACSIN2Q9UNF0 486 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PCDHGA5Q9Y5G8 931 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 WASF2Q9Y6W5 498 aa11.16□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 UGT2B4P06133 528 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 XPAP23025 273 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCNCP24863 283 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ITGB7P26010 798 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SERPINA4P29622 427 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ACSL1P33121 698 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DRD3P35462 400 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NR2C2P49116 596 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NEK3P51956 506 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ADPRHP54922 357 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZNF33AQ06730 810 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ITKQ08881 620 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 AP1B1Q10567 949 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PDK1Q15118 436 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LLGL1Q15334 1064 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 WDR45BQ5MNZ6 344 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FBXL19Q6PCT2 694 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NPNTQ6UXI9 565 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GDPD4Q6W3E5 623 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ASCL5Q7RTU5 278 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TSEN2Q8NCE0 465 aaKnown RBP11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CADM4Q8NFZ8 388 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TRIM58Q8NG06 486 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RUBCNQ92622 972 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 P3H4Q92791 437 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PSKH2Q96QS6 385 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TUBGCP5Q96RT8 1024 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 BRD8Q9H0E9 1235 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ATP13A3Q9H7F0 1226 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NT5MQ9NPB1 228 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SCUBE2Q9NQ36 999 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SERGEFQ9UGK8 458 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TTLL3Q9Y4R7 772 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ADAMTS9Q9P2N4 1935 aa11.15□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 DOCK9Q9BZ29 2069 aa11.15□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 LRRK1Q38SD2 2015 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3DA0A087WVF3 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3IA0A087WXS9 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3EA0A087X179 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3KA0A087X1G2 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3FA6NER0 549 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3LB9A6J9 549 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 MATN3O15232 486 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TJP3O95049 919 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 FSBPO95073 299 aa11.14□□□□□ -0.63
CSPG4P1Y-201ENST00000306641 TBC1D3HP0C7X1 549 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms