RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 RTP4Q96DX8 246 aa20.32■□□□□ 0.84
SCAMP3-201ENST00000302631 LRIG1Q96JA1 1093 aa20.32■□□□□ 0.84
SCAMP3-201ENST00000302631 NUDCD1Q96RS6 583 aa20.32■□□□□ 0.84
SCAMP3-201ENST00000302631 HEPHQ9BQS7 1158 aa20.32■□□□□ 0.84
SCAMP3-201ENST00000302631 C10orf88Q9H8K7 445 aa20.32■□□□□ 0.84
SCAMP3-201ENST00000302631 EML5Q05BV3 1969 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 TCRBV21S2A2A0A5A6 115 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 CFAP69A5D8W1 941 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 DLL1O00548 723 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 ZNF500O60304 480 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 ITGAVP06756 1048 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 CTSLP07711 333 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 CES1P23141 567 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 STIP1P31948 543 aaKnown RBP20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 CHRNA3P32297 505 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 RECQLP46063 649 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 SRLQ86TD4 932 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 TMPRSS6Q8IU80 811 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 ARRDC2Q8TBH0 407 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 MRGPRX1Q96LB2 322 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 NSMCE3Q96MG7 304 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 LRFN3Q9BTN0 628 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 NT5MQ9NPB1 228 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 FBXO4Q9UKT5 387 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 FARP1Q9Y4F1 1045 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 PLXND1Q9Y4D7 1925 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 CUL9Q8IWT3 2517 aa20.31■□□□□ 0.84
SCAMP3-201ENST00000302631 C5orf60A6NFR6 353 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 PDE2AO00408 941 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 APBB3O95704 486 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 NDUFV2P19404 249 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 CD68P34810 354 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 RPS14P62263 151 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 ZBTB16Q05516 673 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 NCEH1Q6PIU2 408 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 ZNF567Q8N184 647 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 TSTD1Q8NFU3 115 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 EXOC2Q96KP1 924 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 POLR1EQ9GZS1 481 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 HAUS2Q9NVX0 235 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 EVLQ9UI08 416 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 TRHDEQ9UKU6 1024 aa20.3■□□□□ 0.84
SCAMP3-201ENST00000302631 CCDC163A0A0D9SF12 145 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 RNF103O00237 685 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 INSIG1O15503 277 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 KCNN4O15554 427 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 LAMTOR5O43504 91 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 ALDH1A2O94788 518 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 PRNPP04156 253 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 MAPK8P45983 427 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 AP1S1P61966 158 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 GRM3Q14832 879 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 ZNF776Q68DI1 518 aaPredicted RBP20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 DSG4Q86SJ6 1040 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 NELL1Q92832 810 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 FAM131CQ96AQ9 280 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 TADA1Q96BN2 335 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 CAPZA3Q96KX2 299 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 HHIPQ96QV1 700 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 TUBGCP5Q96RT8 1024 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 FERMT1Q9BQL6 677 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 TMEM121Q9BTD3 319 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 SEPT10Q9P0V9 454 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 IL36AQ9UHA7 158 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 SARDHQ9UL12 918 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 SCML1Q9UN30 329 aa20.29■□□□□ 0.84
SCAMP3-201ENST00000302631 KRIT1O00522 736 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 ZBTB24O43167 697 aaPredicted RBP20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 GCATO75600 419 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 GDF10P55107 478 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 MAXP61244 160 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 RAD51Q06609 339 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 NIPAL4Q0D2K0 466 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 IHHQ14623 411 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 SLC14A2Q15849 920 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 MDGA1Q8NFP4 955 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 PIP4K2CQ8TBX8 421 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 HCAR2Q8TDS4 363 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 SPOCK2Q92563 424 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 OSBPL1AQ9BXW6 950 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 CEP41Q9BYV8 373 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 SLC25A51Q9H1U9 297 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 NOD2Q9HC29 1040 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 GLOD4Q9HC38 313 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 CDC23Q9UJX2 597 aa20.28■□□□□ 0.84
SCAMP3-201ENST00000302631 BNIP3LO60238 219 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 RNASEH1O60930 286 aaKnown RBP20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 LEFTY1O75610 366 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 GJB3O75712 270 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 MMP2P08253 660 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 PAFAH1B1P43034 410 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 SCNN1BP51168 640 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 NRLP54845 237 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 SNX1Q13596 522 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 CST6Q15828 149 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 ZNF528Q3MIS6 628 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 ARSIQ5FYB1 569 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 ANKRD20A2Q5SQ80 823 aa20.27■□□□□ 0.84
SCAMP3-201ENST00000302631 FAM182AQ5T1J6 154 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms