RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ATP11BQ9Y2G3 1177 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 Q9Y3F1 56 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 HBS1LQ9Y450 684 aaKnown RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 USP3Q9Y6I4 520 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SCN10AQ9Y5Y9 1956 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 KCNU1A8MYU2 1149 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TRIM13O60858 407 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SERPINE1P05121 402 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 PAMP19021 973 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 GRIA4P48058 902 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 GEMP55040 296 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 PLD1Q13393 1074 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 WLSQ5T9L3 541 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TEDDM1Q5T9Z0 273 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 CES4AQ5XG92 561 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 FBXL22Q6P050 247 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TAS2R42Q7RTR8 314 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ARHGAP24Q8N264 748 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 DCBLD1Q8N8Z6 715 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 NT5C3BQ969T7 300 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SLC7A6OSQ96CW6 309 aaPredicted RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SUSD3Q96L08 255 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 RCOR3Q9P2K3 495 aaPredicted RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 FBXO5Q9UKT4 447 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 SF3B1O75533 1304 aaKnown RBP eCLIP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 GREB1Q4ZG55 1949 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 C9JVG2 144 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TRAFD1O14545 582 aaPredicted RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 GSC2O15499 205 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 CCDC166P0CW27 439 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ITGB6P18564 788 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TAS2R39P59534 338 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ABCE1P61221 599 aaKnown RBP9.42□□□□□ -0.9
PRDM9-201ENST00000296682 PTPRRQ15256 657 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ANO4Q32M45 955 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ZNF789Q5FWF6 425 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 PDPK2PQ6A1A2 396 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 LRRC8DQ7L1W4 858 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 LINC00523Q86TU6 105 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 CCNJLQ8IV13 435 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ATP6V0D2Q8N8Y2 350 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 WDR60Q8WVS4 1066 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 APBB2Q92870 758 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 IGSF8Q969P0 613 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TBATAQ96M53 351 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 RBBP8Q99708 897 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 TM6SF2Q9BZW4 377 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 ABCG8Q9H221 673 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 IGSF9Q9P2J2 1179 aa9.42□□□□□ -0.9
PRDM9-201ENST00000296682 A0A0D9SEW6 157 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ERI2A8K979 691 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 TIMM44O43615 452 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 CCND1P24385 295 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 NPY2RP49146 381 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 RENBPP51606 427 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 FRG1Q14331 258 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 RBM20Q5T481 1227 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 CARNMT1Q8N4J0 409 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ZNF398Q8TD17 642 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PYDC1Q8WXC3 89 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ESAMQ96AP7 390 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SLC9A7Q96T83 725 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 GATA5Q9BWX5 397 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ILKAPQ9H0C8 392 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 COG4Q9H9E3 785 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 TLR8Q9NR97 1041 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SHROOM3Q8TF72 1996 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 HHLA1C9JL84 531 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 F5H5T6 163 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 USP1O94782 785 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SKIP12755 728 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 CALB2P22676 271 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 HARS2P49590 506 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 NUDT2P50583 147 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 CCNG1P51959 295 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PKNOX1P55347 436 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PLIN5Q00G26 463 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 GALNT2Q10471 571 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 NOGQ13253 232 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 MBTPS1Q14703 1052 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 PCID2Q5JVF3 399 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 RASIP1Q5U651 963 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 KYAT3Q6YP21 454 aaKnown RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 TMC7Q7Z402 723 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 DEFB107AQ8IZN7 70 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
PRDM9-201ENST00000296682 NTAN1Q96AB6 310 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 MIPEPQ99797 713 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ZYG11BQ9C0D3 744 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 FBXO44Q9H4M3 255 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 ALG9Q9H6U8 611 aa9.41□□□□□ -0.9
PRDM9-201ENST00000296682 KCNK13Q9HB14 408 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms