RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 UROC1Q96N76 676 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 ZYG11BQ9C0D3 744 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 RRN3Q9NYV6 651 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 C2orf78A6NCI8 922 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 MOXD2PA6NHM9 499 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 RAMP2O60895 175 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 GLRA3O75311 464 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 GJA1P17302 382 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 ARNTP27540 789 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 EPHA3P29320 983 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 LIMK2P53671 638 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 SLC25A3Q00325 362 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 PDCD2Q16342 344 aaPredicted RBP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 TRIM68Q6AZZ1 485 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 DENND5AQ6IQ26 1287 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 HAPLN3Q96S86 360 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 THTPAQ9BU02 230 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 CADM1Q9BY67 442 aaKnown RBP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
RUBCN-202ENST00000296343 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 EIF2B3Q9NR50 452 aaKnown RBP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
RUBCN-202ENST00000296343 DCXO43602 365 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 ACRP10323 421 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 CCNCP24863 283 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 MPSTP25325 297 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 HCAR3P49019 387 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 EPHB1P54762 984 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 PGBD5Q8N414 524 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 HDAC10Q969S8 669 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 FAM161BQ96MY7 647 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 NUF2Q9BZD4 464 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SCML2Q9UQR0 700 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TLR6Q9Y2C9 796 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 CABYRO75952 493 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 PROCP04070 461 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SLC6A4P31645 630 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 AIF1P55008 147 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 COG7P83436 770 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 BRMS1LQ5PSV4 323 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TMEM198Q66K66 360 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 PKN3Q6P5Z2 889 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 MAVSQ7Z434 540 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 ZC3HC1Q86WB0 502 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 PPHLN1Q8NEY8 458 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 OR13C4Q8NGS5 318 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 PIWIL2Q8TC59 973 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 NUDCD1Q96RS6 583 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 BPIFA1Q9NP55 256 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 THAP1Q9NVV9 213 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 XPR1Q9UBH6 696 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 ZFP37Q9Y6Q3 630 aaPredicted RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 CFAP73A6NFT4 308 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 CHUKO15111 745 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 ANP32DO95626 131 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SERPINB5P36952 375 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 CCNFP41002 786 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SLC12A2P55011 1212 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TAS2R39P59534 338 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TLE2Q04725 743 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 KPNB1Q14974 876 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 GRTP1Q5TC63 336 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 WDR75Q8IWA0 830 aaKnown RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 FSTL5Q8N475 847 aaPredicted RBP13.36□□□□□ -0.27
RUBCN-202ENST00000296343 DNAJC5GQ8N7S2 189 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 MAPK15Q8TD08 544 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 SEPT8Q92599 483 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 RMDN1Q96DB5 314 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 HHIPL1Q96JK4 782 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 TBATAQ96M53 351 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 DCDC2Q9UHG0 476 aa13.36□□□□□ -0.27
RUBCN-202ENST00000296343 FAM95CA0A1B0GW59 222 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 MTSS1O43312 755 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 SEC24AO95486 1093 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 SERPINB8P50452 374 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 PRAMEP78395 509 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 ZNF235Q14590 738 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 TRIM60Q495X7 471 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 KHDC1Q4VXA5 237 aaKnown RBP13.35□□□□□ -0.27
RUBCN-202ENST00000296343 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 SKA1Q96BD8 255 aa13.35□□□□□ -0.27
RUBCN-202ENST00000296343 NSL1Q96IY1 281 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms