RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 GPR78Q96P69 363 aa13.86□□□□□ -0.19
NCSTN-201ENST00000294785 CDRT15Q96T59 188 aa13.86□□□□□ -0.19
NCSTN-201ENST00000294785 MRPL57Q9BQC6 102 aaKnown RBP13.86□□□□□ -0.19
NCSTN-201ENST00000294785 TMEM30AQ9NV96 361 aa13.86□□□□□ -0.19
NCSTN-201ENST00000294785 SMIM31A0A1B0GVY4 71 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 FAM95CA0A1B0GW59 222 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 DLX3O60479 287 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 THP07101 528 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 ME2P23368 584 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 GSTT1P30711 240 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 HOXC13P31276 330 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 EPHX2P34913 555 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 THOP1P52888 689 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 PPM1LQ5SGD2 360 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 UGT2A3Q6UWM9 527 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 OTOP3Q7RTS5 596 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 SLC41A1Q8IVJ1 513 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 EDEM1Q92611 657 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 RCN3Q96D15 328 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 FAR2Q96K12 515 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 GLOD4Q9HC38 313 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 VCX3AQ9NNX9 186 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 ARHGEF38Q9NXL2 777 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 NEU3Q9UQ49 428 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 TCAF1Q9Y4C2 921 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 COMMD3-BMI1R4GMX3 469 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 IGLV3-25P01717 112 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 SAT1P21673 171 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 HOXC8P31273 242 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 GLRBP48167 497 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 POU4F1Q01851 419 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 ADGRE1Q14246 886 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 CNPY1Q3B7I2 92 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 KIAA0408Q6ZU52 694 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 ADCY4Q8NFM4 1077 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 RNF34Q969K3 372 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 CCDC126Q96EE4 140 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 CELF6Q96J87 481 aaKnown RBP13.85□□□□□ -0.19
NCSTN-201ENST00000294785 HAPLN3Q96S86 360 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 MRPL40Q9NQ50 206 aaKnown RBP13.85□□□□□ -0.19
NCSTN-201ENST00000294785 UTP6Q9NYH9 597 aaKnown RBP13.85□□□□□ -0.19
NCSTN-201ENST00000294785 PATJQ8NI35 1801 aa13.85□□□□□ -0.19
NCSTN-201ENST00000294785 MATN3O15232 486 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 VAPBO95292 243 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 PGK1P00558 417 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 HSPA13P48723 471 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 ART3Q13508 389 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 KIAA0930Q6ICG6 404 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 DENND5AQ6IQ26 1287 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 TIGD7Q6NT04 549 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 C2CD4AQ8NCU7 369 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CEP70Q8NHQ1 597 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CATSPER2Q96P56 530 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CLIC5Q9NZA1 410 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 SNX10Q9Y5X0 201 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 MYLKQ15746 1914 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 BCAS2O75934 225 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 ADRA1AP35348 466 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 AVPR1AP37288 418 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CD151P48509 253 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CLCNKBP51801 687 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 RABGGTBP53611 331 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 EIF4EBP2Q13542 120 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 NXNQ6DKJ4 435 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 LRRC49Q8IUZ0 686 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 AFAP1L2Q8N4X5 818 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 DQX1Q8TE96 717 aaKnown RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 BRI3BPQ8WY22 251 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 HACD3Q9P035 362 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 RIMS3Q9UJD0 308 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 C15orf38-AP3S2A0A0A6YYH1 394 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 DFFAO00273 331 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CAPNS1P04632 268 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 ATP5F1P24539 256 aaPredicted RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 POU6F1Q14863 301 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 MAPRE2Q15555 327 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CNGA3Q16281 694 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 RWDD4Q6NW29 188 aaKnown RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 ARPINQ7Z6K5 226 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 TICAM1Q8IUC6 712 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CEP97Q8IW35 865 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 SPATA22Q8NHS9 363 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 NXNL1Q96CM4 212 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 TREX1Q9NSU2 369 aa13.84□□□□□ -0.19
NCSTN-201ENST00000294785 COPG1Q9Y678 874 aaKnown RBP13.84□□□□□ -0.19
NCSTN-201ENST00000294785 CAPN8A6NHC0 703 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms