RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 KATNAL2Q8IYT4 538 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 MYO1HQ8N1T3 1032 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 MAGEC3Q8TD91 643 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 MCRS1Q96EZ8 462 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ASB2Q96Q27 587 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 CINPQ9BW66 212 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 REXO4Q9GZR2 422 aaKnown RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 CDHR5Q9HBB8 845 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 UBA2Q9UBT2 640 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 UTRNP46939 3433 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 VPS4BO75351 444 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ALOX15P16050 662 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 RXRGP48443 463 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 GTF2BQ00403 316 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 PWP1Q13610 501 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TIGD5Q53EQ6 642 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TTC23Q5W5X9 447 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 FBXW8Q8N3Y1 598 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 EMC1Q8N766 993 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ENKURQ8TC29 256 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TRIM8Q9BZR9 551 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ST6GALNAC4Q9H4F1 302 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 SCN10AQ9Y5Y9 1956 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM114B3SHH9 223 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TSC22D2O75157 780 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 KATNA1O75449 491 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 FBXO21O94952 628 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 KRT6BP04259 564 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 HOXB8P17481 243 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 CYP2F1P24903 491 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 CDC25CP30307 473 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 KRT6CP48668 564 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TOP3AQ13472 1001 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ACAP1Q15027 740 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 AAGABQ6PD74 315 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 DNAAF5Q86Y56 855 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZFP42Q96MM3 310 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 GAD1Q99259 594 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 KRCC1Q9NPI7 259 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 DNPEPQ9ULA0 475 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM50BQ9Y247 325 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 C9IYK1 514 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ENTPD5O75356 428 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ALOX12P18054 663 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 NPY2RP49146 381 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 DDX39BQ13838 428 aaKnown RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZNF606Q8WXB4 792 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZNF512Q96ME7 567 aaPredicted RBP11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 RNF145Q96MT1 663 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 SLITRK1Q96PX8 696 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 APOL2Q9BQE5 337 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 EMILIN2Q9BXX0 1053 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 LMAN2LQ9H0V9 348 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 TRPC7Q9HCX4 862 aa11.98□□□□□ -0.49
SYNGAP1-201ENST00000293748 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 SNPHO15079 494 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CD3EAPO15446 510 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 KRT36O76013 467 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 RECQL4O94761 1208 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 APOC2P02655 101 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 RPA3P35244 121 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 NR2C2P49116 596 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 DEFB103AP81534 67 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 PALB2Q86YC2 1186 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 MIER2Q8N344 545 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 TRPC4APQ8TEL6 797 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 MRPL48Q96GC5 212 aaKnown RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 SPRTNQ9H040 489 aaPredicted RBP11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 BTBD3Q9Y2F9 522 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CRTAMO95727 393 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 GLP2RO95838 553 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 POMCP01189 267 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 KRT6AP02538 564 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CA3P07451 260 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 MYBL2P10244 700 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ST8SIA6P61647 398 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 ITGADQ13349 1161 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 CYP2R1Q6VVX0 501 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM131BQ86XD5 332 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 IQCKQ8N0W5 287 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 TTC30BQ8N4P2 665 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM176AQ96HP8 235 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 DEPDC7Q96QD5 511 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM175Q9BSA9 504 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 OSBPL10Q9BXB5 764 aa11.97□□□□□ -0.49
SYNGAP1-201ENST00000293748 DPY30Q9C005 99 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms