RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 UBDO15205 165 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PSMD3O43242 534 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 TPBGLP0DKB5 382 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ICAM3P32942 547 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 CYP51A1Q16850 503 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ZIK1Q3SY52 487 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SPANXN3Q5MJ09 141 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SCARA3Q6AZY7 606 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PPP4R4Q6NUP7 873 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PARP8Q8N3A8 854 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 STX19Q8N4C7 294 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 WDTC1Q8N5D0 677 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 PPP1R14BQ96C90 147 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 ACE2Q9BYF1 805 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 VTA1Q9NP79 307 aa12.7□□□□□ -0.38
SLC6A1-201ENST00000287766 LDLRP01130 860 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 GRIA4P48058 902 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CPT1AP50416 773 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 SLC25A11Q02978 314 aaKnown RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 GLB1LQ6UWU2 654 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TEPSINQ96N21 525 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CITED4Q96RK1 184 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 PEBP4Q96S96 227 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CD274Q9NZQ7 290 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 SIX4Q9UIU6 781 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 SMIM28A0A1B0GU29 152 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 IDH3BO43837 385 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TSPAN1O60635 241 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 C2P06681 752 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 APOA4P06727 396 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 FESP07332 822 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CD151P48509 253 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 AKR1D1P51857 326 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CCDC153Q494R4 210 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 GALNTL6Q49A17 601 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 DPY19L2P1Q6NXN4 242 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TTC30AQ86WT1 665 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TRIM69Q86WT6 500 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 MRPS26Q9BYN8 205 aaKnown RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TMEM216Q9P0N5 145 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TCEA3O75764 348 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 MPSTP25325 297 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CXCL17Q6UXB2 119 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CTU1Q7Z7A3 348 aaKnown RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 UNC93AQ86WB7 457 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 EMID1Q96A84 441 aaPredicted RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 PCYT2Q99447 389 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 FZD8Q9H461 694 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CYTH4Q9UIA0 394 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 CROTQ9UKG9 612 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 COL4A1P02462 1669 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 FAM95CA0A1B0GW59 222 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ABLIM1O14639 778 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TOMM70O94826 608 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 MYO1DO94832 1006 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 COX4I1P13073 169 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 GMPRP36959 345 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 DGUOKQ16854 277 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 EGFLAMQ63HQ2 1017 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 B3GNT9Q6UX72 402 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 NET1Q7Z628 596 aaPredicted RBP12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 UCMAQ8WVF2 138 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 RBBP8Q99708 897 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 POMKQ9H5K3 350 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ENTPD7Q9NQZ7 604 aa12.69□□□□□ -0.38
SLC6A1-201ENST00000287766 ADAMTS7Q9UKP4 1686 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 LOC100506127A0A0U1RQW1 187 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 HACD1B0YJ81 288 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SEMA3DO95025 777 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 LHX1P48742 406 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 LPIN1Q14693 890 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 POLD3Q15054 466 aaPredicted RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SNX31Q8N9S9 440 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms